Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01783 ATGGGCAGCAGTGACGTCGATAAACCGTTAAAAGAAAAAGAGCCTAAGACGCCTCCAGCGGCTACGTCACAGGAGCAAACATCAACGACAACTGGCACTGCGGCAGTTAATCCTGACTGGGCTAACTATCAGGCATATTCGCATATACCTCCACCTGGATTCATGGCATCAAGTCCCCAAGCCCACCCATATATGTGGGGTGTTCAGCATATTATGCCTCCCTATGGCACCCCACCACATCCTTATGTTGCAATGTATCCCCATGGTGGCATATATGCCCATCCATCCATGCCTCCGGGATCTTATCCTTTTAGTCCTTTTGCCATGCCTTCTCCAAATGGCATGGTGGATGCTTCAGGGAATACTCCAGGCAGCAGTGAAGCTGATGGTAAACCTCATGAGGTGAAGGAAAAATTACCAATCAAAAGATCAAAAGGAAGTTTGGGTAGTATGAATATGGTTCCAGTTCCAGGAAAAAATAATGAACTAGGTAAAACACCAGGGGTTTCTGCCAATGGAATTCATTCAAAAAGTGGTGAGAGTGCAAGTGAAGGTACTAGTGAAGGAAGCGATGAAAACTCCCATAATGACTCTCAATTGAAATCTGGGGAGAGGCAGGATTCTTATGAAGATGAACCCTCTCAAAATGGCAGTTCAGTGCATGCTCCTCAAAATGGGGTACTTAATACACCTCATACAGTTGTTAATCAAACTATGTCTGTCGTACCTATGTCTGCTGCTGGTCCTCTCACAGCAGTTCCTGGTCCCACTACTAATTTAAATATAGGAATGGATTATTGGGGAACACCAACTTCATCTACCATGCCTGCAATGCATGGAAAGGTTCCTTCTGCTGCAGTGGCTGGAGGGATGGTAAATGCTGGGTCACGAGATGTCCACTCACAACTTTGGTTACAGGATGAAAGAGAGCTTAAAAGACAAAGGCGGAAGCAGTCCAATAGGGAATCTGCACGCAGGTCCAGGTTGCGAAAGCAGGCTGAATGTGATGAACTAGCTCAGCGGGCTGAAGTTTTGAATGAAGAAAATGCCTCTCTCCGTGCTGAACTGAACCGGATCAAGAGTGAGTACGAGAAGATACTTTCTGAGAATGCAGCTCTCAAGGAGAGACTCGGGGAGATACCAAGGACTGAGGATCTTGGCCCGGGCCAGAATGATCAGCATGTTGAAGCTACTCAACAGAGTGGTTAG 1209 0.4657 MGSSDVDKPLKEKEPKTPPAATSQEQTSTTTGTAAVNPDWANYQAYSHIPPPGFMASSPQAHPYMWGVQHIMPPYGTPPHPYVAMYPHGGIYAHPSMPPGSYPFSPFAMPSPNGMVDASGNTPGSSEADGKPHEVKEKLPIKRSKGSLGSMNMVPVPGKNNELGKTPGVSANGIHSKSGESASEGTSEGSDENSHNDSQLKSGERQDSYEDEPSQNGSSVHAPQNGVLNTPHTVVNQTMSVVPMSAAGPLTAVPGPTTNLNIGMDYWGTPTSSTMPAMHGKVPSAAVAGGMVNAGSRDVHSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEVLNEENASLRAELNRIKSEYEKILSENAALKERLGEIPRTEDLGPGQNDQHVEATQQSG 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01783 402 Coils Coil 328 376 - -
Car07g01783 402 MobiDBLite consensus disorder prediction 129 143 - -
Car07g01783 402 MobiDBLite consensus disorder prediction 212 230 - -
Car07g01783 402 CDD bZIP_plant_GBF1 313 363 IPR045314 GO:0003700|GO:0006355
Car07g01783 402 SMART brlzneu 308 372 IPR004827 GO:0003700|GO:0006355
Car07g01783 402 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 310 373 IPR004827 GO:0003700|GO:0006355
Car07g01783 402 MobiDBLite consensus disorder prediction 165 189 - -
Car07g01783 402 MobiDBLite consensus disorder prediction 1 15 - -
Car07g01783 402 PANTHER BZIP TRANSCRIPTION FACTOR FAMILY PROTEIN 1 402 - -
Car07g01783 402 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 315 330 IPR004827 GO:0003700|GO:0006355
Car07g01783 402 MobiDBLite consensus disorder prediction 190 211 - -
Car07g01783 402 MobiDBLite consensus disorder prediction 378 402 - -
Car07g01783 402 SUPERFAMILY Leucine zipper domain 311 366 IPR046347 GO:0003700|GO:0006355
Car07g01783 402 Gene3D - 311 380 - -
Car07g01783 402 MobiDBLite consensus disorder prediction 1 36 - -
Car07g01783 402 Pfam bZIP transcription factor 308 370 IPR004827 GO:0003700|GO:0006355
Car07g01783 402 Pfam G-box binding protein MFMR 1 98 IPR012900 -
Car07g01783 402 Pfam Disordered region downstream of MFMR 137 276 - -
Car07g01783 402 MobiDBLite consensus disorder prediction 19 36 - -
Car07g01783 402 MobiDBLite consensus disorder prediction 309 333 - -
Car07g01783 402 MobiDBLite consensus disorder prediction 113 230 - -
Car07g01783 402 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 402 IPR044827 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01783 Car-Chr7 18595659 18602430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01783 1 402 bZIP Transcription Factor Family AT2G35530 61.858 4.12e-165 467
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car07g01783 MFMR_assoc 7e-55 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01783 K09060 - gmx:100101912 607.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00909 08 8195423 8202120 Car07g01783 07 18595659 18602430 PCT