Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01778 atggcatttctcataagggcggttccatctaacggTCATTTCAATAAAAACCAGCTTTCTGGTTCCATTCCTTCCAAACTTTTCAGCTCTGACATGGCACTCATACACATATTATTTTATGGGAATGATTTAAGTGGGAGTATACCTTCTACAATAGGACTAGTTAACACAGTTGAAGTTCTTCGGCTCGATCGAAATTTCTTGACAGGAGAGGTTCCTTCAAATCTCAATAACCTTATTCGCATCAACGAATTGAATTTAGCACACAACAATTTGTCAGGTCCTTTGCCAGACTTAACTTCATTGGTTTCCCTCAACTATGTGGATCTTAGTAATAATTCTTTTGATCCATCAGAAGTTCCAATTTGGTTCTCCACTCTACAATCACTCACCACTCTTGTTATGGAGTTTGGATCTCTTGAAGGTCCTCTTCCATCAGAACTCTTCAGCATTCCTCAAATACAGCAAATGAAACTAAGAAACAATGCATTGAACAAAACCCTAGACATGGGTGACAACATGTCCCCAATTGCAGCTTGTGGACTTACAAGACAACCAGATTTCAAGGGTAACAGTCGTCTCATAGGAAATCCAGTGTGCAGCACTGGTATCTCTAATACAAAATACTGTCAACTTCAGCAACAACCTAAAAAACCCTATTCAACTAGCTTGGCTAATTGTGGAGAATTATCATGTCCCCCTGATCAAAATGTAAGTCCACAAAGTTGTGAATGTGCTTATCCATACCAAGGAATGTTGTTCTTTAGAGGACCCTTGTTCAGTGAACTGTCGAATATAACTATTTTCCATTCACTTGAAATGAGTTTATGGGTGAAATTGGGTTTAACACCTGGCTCAGTTTCTTTACAAAACCTTTTCTTCAATAGTGATGATTATCTTCAAATACATCTAGCACTGTTTCCACCAACAGGACTGAATTTTAATAGGTCAGAAGTTCAAAGAATTGGATTTGCATTGAATTCTCACAGAGGAGCCTCTTTTAGCAGAGGTGTTATTATTGGGATAGCAACTGGGAGCATATGTCTAATTCTGTGCCTTATAGGGTTAGGAGTATACGCAATCCTCCAAAAGAAGCGCGCAGAGAAAGCCATTGGAATAAGTAGACCTTTCGCATCCTGGGCACCAAGTGGCACGGATAGTGGAGGTGCACCACAATTGAAGGGAGCAAGATGGTTCTCTTATGATGAACTCAAAAAGGGAACCAACAATTTCTCTGGAAGCAACGAGTTAGGCTTTGGTGGCTATGGCAAGGTGTACAAAGGGGTTCTCCGTGATGGAAAAATAGTTGCAATCAAAAGAGCTCAGCAAGGATCAATGCAAGGAGGCCTAGAGTTCAAGAATGAAATAGAGTTGCTTTCAAGATTTCATCACAAGAATCTTGTTGGCCTTGTGGGGTTCTGCTTTGAACAAGGAGAACAGATGTTGGTTTACGAATTTATCACCAATGGTTCACTTAGGGAGACTTTGTCAGGTCAGAGATCTGACATTCAACTTGATTGGAAGAGGAGACTTCGTATCGCTCTTGGTTCGGTTAGAGGACTTGCATACTTACATGAACTTGCCAACCCTCTCATAATCCACGGAGATGTGAAGTCAACCAATATCTTGCTGGATGAAAATTTGACAGCAAAGGTTGCAGATTTTGGTCTGTCTAAGCTGGTATCAGACAGTGAGAAAGGTCATGTCTCAACTCAGGTTAAAGGAACATTGGGATATCTTGATCCTGAATATTACATGACTCAACAACTAACTGACAAAAGTGATGTATACAGTTTTGGTGTAGTTATGCTTGAACTGATAACATCCAAACAACCAATTGAAAAGGGTAAGTACATTGTTCGCGAGGTTCGAACTTTGTCGAACAACAGAGAAGAAGAGTATTATGGTTTGAACGAACTAATGGATCCAGTGGTGAGAAACACTGCAAACCCAATAGGATTCGGGAGATTCTTAGAGTTGACAATGCAATGCGTCGAGGAATCGGCCGCAAATCGTCCAACTATGAGTGAAGTTGTGAAAGCATTAGAAACCATATTGCATAATGATGGAATGAACACAAATTCTACTTCTACTTCCTCTTCTGCCAATGATTTTGGAGTTTCTAAGGGTGCTGCAATGAGACATCCTTATATTGATGCTACTTTTACTAAGAATGACAATAATGCCTTTGATTATAGTGGAGGatcgcgttacagttttgttcaaaggATGGGCTAA 2238 0.3887 MAFLIRAVPSNGHFNKNQLSGSIPSKLFSSDMALIHILFYGNDLSGSIPSTIGLVNTVEVLRLDRNFLTGEVPSNLNNLIRINELNLAHNNLSGPLPDLTSLVSLNYVDLSNNSFDPSEVPIWFSTLQSLTTLVMEFGSLEGPLPSELFSIPQIQQMKLRNNALNKTLDMGDNMSPIAACGLTRQPDFKGNSRLIGNPVCSTGISNTKYCQLQQQPKKPYSTSLANCGELSCPPDQNVSPQSCECAYPYQGMLFFRGPLFSELSNITIFHSLEMSLWVKLGLTPGSVSLQNLFFNSDDYLQIHLALFPPTGLNFNRSEVQRIGFALNSHRGASFSRGVIIGIATGSICLILCLIGLGVYAILQKKRAEKAIGISRPFASWAPSGTDSGGAPQLKGARWFSYDELKKGTNNFSGSNELGFGGYGKVYKGVLRDGKIVAIKRAQQGSMQGGLEFKNEIELLSRFHHKNLVGLVGFCFEQGEQMLVYEFITNGSLRETLSGQRSDIQLDWKRRLRIALGSVRGLAYLHELANPLIIHGDVKSTNILLDENLTAKVADFGLSKLVSDSEKGHVSTQVKGTLGYLDPEYYMTQQLTDKSDVYSFGVVMLELITSKQPIEKGKYIVREVRTLSNNREEEYYGLNELMDPVVRNTANPIGFGRFLELTMQCVEESAANRPTMSEVVKALETILHNDGMNTNSTSTSSSANDFGVSKGAAMRHPYIDATFTKNDNNAFDYSGGSRYSFVQRMG 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01778 745 CDD STKc_IRAK 417 685 - -
Car07g01778 745 PANTHER LRR RECEPTOR-LIKE KINASE 13 329 - -
Car07g01778 745 ProSiteProfiles Protein kinase domain profile. 411 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01778 745 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 13 329 - -
Car07g01778 745 Gene3D Transferase(Phosphotransferase) domain 1 487 707 - -
Car07g01778 745 ProSitePatterns Protein kinases ATP-binding region signature. 417 439 IPR017441 GO:0005524
Car07g01778 745 Gene3D Ribonuclease Inhibitor 10 196 IPR032675 -
Car07g01778 745 PANTHER LRR RECEPTOR-LIKE KINASE 328 718 - -
Car07g01778 745 SMART serkin_6 411 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01778 745 SUPERFAMILY Protein kinase-like (PK-like) 396 696 IPR011009 -
Car07g01778 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 532 544 IPR008271 GO:0004672|GO:0006468
Car07g01778 745 SUPERFAMILY L domain-like 14 174 - -
Car07g01778 745 Gene3D Phosphorylase Kinase; domain 1 385 486 - -
Car07g01778 745 Pfam Protein tyrosine and serine/threonine kinase 415 682 IPR001245 GO:0004672|GO:0006468
Car07g01778 745 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 328 718 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01778 Car-Chr7 18454312 18513351 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01778 13 735 Receptor kinase-like Gene Family AT1G79620 63.787 0.0 974
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Car07g01778 PK_Tyr_Ser-Thr 8.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01778 - - gmx:100792249 1108.59