Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01767 ATGGATCCTGGTCGCTATGCACTGCATCAAGGCTGGGATAATAATAACAGCGCTCTTGAGGGTTATGGTGCGGTCCATGAGCCAAATTTCCGGGTCGGTGCCTCTTTTGATGAAAGACGGTTTATAGATGGAAGATATCCCAGGGATGCTATATACCAGAGAAATAATTTCCACCGTGATGTTTTGGATAGGGAGGCCTATTTGCCACCAGGACCTGCTGTTGGCCACTGGAGTCAATCCAAACGGAGAGGTTATGATGAAGATTATCCACTTGAAAGGGAATCTAGACGTTTTCAAAGGCCTTATCCTGAATCATATAATCAGATGGATGGTTTCAGGGATCGTGAGATTGACATGTACCCGGAGTATGACAAGTTTCGTGATGGTTATACCAACATTGAAAACTATGGTGATAGAGGCTATGACAAACCTTCCAGGTTTGCAGGGAATGATCATGATGAATATGCATATGATGATTATGACCACAAATCccgtgtttcacatcatcgtagggaggatagccatgagAGGGATTACGATCATGGTCGGCATAGTAGTTATGATTCTGATTATGAAAGAGGTAGTAGAAGAGATAGTAATTGGAGGCGACACGAATCACGTGATCGAGAACGAGACAAGAGATGTCTTAGTAGGGACAAAGATTCAAGTCCGCATAAGAAACATGAGcggtcgcgatcccgttcacgatcccattctcgatctcgatcccattcccggtcccattctcaccctcgttcccgttcccaatctcgtGGATATGAGGATCATCCAAATTCTAGGTCTCCTCGAGGTCGAAGCCATAGTCGAAGTTATCGGGAAGACAGCTATGTTGACAATCGATATGATAGAAGTGATAGACGCAGGGATCGTGATGACAAACATCAGCGGGAGCATTATGCTGTGGCCCCTTCTGCAACTGTTGTTGTGAAAGGTCTTTCACAGAAGACGACTGAAGAAGATCTATACCAAATCCTTGCGGAATGGGGTCCACTTCGTCATGTTCGTGTTATAAAGGAGAGAAATTCTGGCATCTCTCGTGGATTTGCATTTATTGATTTTCCATCTGTGGGAGCTGCACAAGGCATGATGGACAAACTAGCAGATGATGGTTTTGTTGTGGATGGCAGAAAGCTTTTCTTTGAATATAGTAGTAAGCCAACTGGAGGTTCAGGTGCAGATGGAGCTATGAAATCAGGTCATAGTCACAAGAGCATTACAGTACCGTCTGATTGGATGTGCACTATATGCAGCTACATTAATTTTGCACGCCGGACTTCCTGCTATCAGTGTAATGAACCACGCACTGATGATGCTCCTGCAGCAGATATTTCATTATCAAATTCAACAGCCTTTGGAAAGAAAAGTTTAGAGGCGGGTCCAACTCATGTATTGGTTGTCCGAGGATTGGATGAAAATGCTGATGAGGAAATGCTCCGCTATGAATTTTCCAAACATGCTCCAATCAAGGATCTACGTCTTGTGAGAGACAAATTTACTCATGTCTCAAGGGGATTTGCATTTGTACATTTTTACTCGGTAGAGGATGCTACCAAAGCTCTTGACTCAACAAACGGGACGACCCTTGAGAAGAATGGGCAGATTCTGAGAGTAGCATATGCAAAAAGCATACTGGGCCAAGGATCAGGAGCGTCAGGAACTTCACAATCAAGCAGTCTTGCAGCTGCAGCTATTGAGGCTGCAACATTTGCCCAACAGTATGATTCTGTCGGATGGGCTCCCAAAGAATATAATCCAGATGACAAACAATCTAATGGTCCAGAGCAGACTGGTACTGAAGTTGGTGCACCACAATCAGGCTTTGTTTGGGATGAAGCATCTGGTTATTACTACGATGCTTCTTCTGGGTTTTATTATGATGGGAATACTGGTCTTTACTATGATGGCAATAATGGGATTTGGTATTCATATGACCACCATACTCAGCAGTACATCCCATGCACTGATCAAAATCAGAATAAAACATCTAATAATGAATCTGAACCTTCTAAGGCTTTTGACGGATCGAACAATAAAAAAGTAGTGATTTCTGCGCCTGCTACTACTGTTACTTCAAACGAGAAGCCAGCTTCACTAGCAGATGCTGTCCAGGCTGCTGCAGCTGCTGCTTTAGCTGCAGAGAAGAAAGAGAAAGAAAAATCAAAGGAGATTAAACTTGCTTCAAAAAGCAGTATTCTGGCAAACAAGAAAAAAATGAACAATGTGCTAACAATGTGGAAGCAGAGGAGTCATGAGGGACAAGCTACTCGAGTGGCACTGGAGGACAATCAGTTATCTGGTTCTGCTGATGATAGACCATATTCCTCTACACATTCTGGAAAGAATAAGTTAAAAAATGATACAGCAACAAGGGAAATTAATGCGTCTAATAATCTGGGAGGTCACACTCAGGTTGCCGCTGTTGAGTCTCAGGCACAGCCACGGCCCATTAGTAATAGCCTTGGGGGCACTCTGATGGGGGTTATAAGGGGATCAGGAAGAGGGGTTGTTAAATCAGATACTTATTCTGGCTCTCTGTCTGCCACACCATCTATTTCAGCTTCATCTTCAGCAAATGTTGATGCACAGACATTTTCTACTCCCTTTAAAACAGACGTCTCTTCACTGGGTTCATATGCACCATCTGTGTCTGCTGGAAGTGGTAGAAGAAGGTTTTCAGAAATGCCTCATTCTGCTTCAACTCATAAGGAACAATCTCAAACAACCTACAGGGATAGGGCAGCTGAGAGAAGAAGTTTGTATGGCTCGTCGTCTTCGGTTGGCAATGATTTGGCTGACCTTGAAATTGGGGATTCAACTCGAGATTTTTCATCAAGAAAGGGTGATTCAATGCCATTCCCTCCTGGGGTTGGTGGAGGACGCGTGGTTGGAGATGTCAACCTTGATACTTTTGAAGTGATTACGGCAGACAAAGCGATTGATGAAAAAAATGTTGGTAATCGGATGCTTCGCAACATGGGATGGCAGGAAGGCTTGGGACTAGGAAAAGATGGAAGTGGAATGATAGAGCCTGTTCAGACACAAGCAATGGAAAATAGAGCAGGACTTGGGAGTCAACAGAAAAAGTTGGACCCTAGCCTTGAGGTGCAGGCCGGTGATAGCTACAAGATGCTCATTCATAAAAAAGCACTTGCCAGGTTCCGGGAAATGTAA 3192 0.4189 MDPGRYALHQGWDNNNSALEGYGAVHEPNFRVGASFDERRFIDGRYPRDAIYQRNNFHRDVLDREAYLPPGPAVGHWSQSKRRGYDEDYPLERESRRFQRPYPESYNQMDGFRDREIDMYPEYDKFRDGYTNIENYGDRGYDKPSRFAGNDHDEYAYDDYDHKSRVSHHRREDSHERDYDHGRHSSYDSDYERGSRRDSNWRRHESRDRERDKRCLSRDKDSSPHKKHERSRSRSRSHSRSRSHSRSHSHPRSRSQSRGYEDHPNSRSPRGRSHSRSYREDSYVDNRYDRSDRRRDRDDKHQREHYAVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVGAAQGMMDKLADDGFVVDGRKLFFEYSSKPTGGSGADGAMKSGHSHKSITVPSDWMCTICSYINFARRTSCYQCNEPRTDDAPAADISLSNSTAFGKKSLEAGPTHVLVVRGLDENADEEMLRYEFSKHAPIKDLRLVRDKFTHVSRGFAFVHFYSVEDATKALDSTNGTTLEKNGQILRVAYAKSILGQGSGASGTSQSSSLAAAAIEAATFAQQYDSVGWAPKEYNPDDKQSNGPEQTGTEVGAPQSGFVWDEASGYYYDASSGFYYDGNTGLYYDGNNGIWYSYDHHTQQYIPCTDQNQNKTSNNESEPSKAFDGSNNKKVVISAPATTVTSNEKPASLADAVQAAAAAALAAEKKEKEKSKEIKLASKSSILANKKKMNNVLTMWKQRSHEGQATRVALEDNQLSGSADDRPYSSTHSGKNKLKNDTATREINASNNLGGHTQVAAVESQAQPRPISNSLGGTLMGVIRGSGRGVVKSDTYSGSLSATPSISASSSANVDAQTFSTPFKTDVSSLGSYAPSVSAGSGRRRFSEMPHSASTHKEQSQTTYRDRAAERRSLYGSSSSVGNDLADLEIGDSTRDFSSRKGDSMPFPPGVGGGRVVGDVNLDTFEVITADKAIDEKNVGNRMLRNMGWQEGLGLGKDGSGMIEPVQTQAMENRAGLGSQQKKLDPSLEVQAGDSYKMLIHKKALARFREM 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01767 1063 MobiDBLite consensus disorder prediction 662 682 - -
Car07g01767 1063 SMART zf_4 416 440 IPR001876 -
Car07g01767 1063 MobiDBLite consensus disorder prediction 756 794 - -
Car07g01767 1063 MobiDBLite consensus disorder prediction 254 305 - -
Car07g01767 1063 Gene3D - 275 411 IPR012677 -
Car07g01767 1063 Gene3D - 454 600 IPR012677 -
Car07g01767 1063 CDD RRM1_RRM2_RBM5_like 310 390 - -
Car07g01767 1063 ProSitePatterns Zinc finger RanBP2-type signature. 418 437 IPR001876 -
Car07g01767 1063 SMART rrm1_1 470 545 IPR000504 GO:0003723
Car07g01767 1063 SMART rrm1_1 313 388 IPR000504 GO:0003723
Car07g01767 1063 SMART G-patch_5 986 1032 IPR000467 GO:0003676
Car07g01767 1063 MobiDBLite consensus disorder prediction 587 612 - -
Car07g01767 1063 Pfam G-patch domain 989 1030 IPR000467 GO:0003676
Car07g01767 1063 PANTHER RNA-BINDING PROTEIN 222 1063 - -
Car07g01767 1063 PANTHER RNA-BINDING PROTEIN 39 214 - -
Car07g01767 1063 MobiDBLite consensus disorder prediction 229 253 - -
Car07g01767 1063 MobiDBLite consensus disorder prediction 882 933 - -
Car07g01767 1063 CDD RRM1_RRM2_RBM5_like 467 547 - -
Car07g01767 1063 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 314 373 IPR000504 GO:0003723
Car07g01767 1063 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 471 537 IPR000504 GO:0003723
Car07g01767 1063 MobiDBLite consensus disorder prediction 139 228 - -
Car07g01767 1063 SUPERFAMILY RNA-binding domain, RBD 229 390 IPR035979 GO:0003676
Car07g01767 1063 Gene3D - 412 444 - -
Car07g01767 1063 Pfam OCRE domain 611 659 IPR041591 -
Car07g01767 1063 MobiDBLite consensus disorder prediction 662 680 - -
Car07g01767 1063 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 312 392 IPR000504 GO:0003723
Car07g01767 1063 PANTHER FI21118P1 39 214 - -
Car07g01767 1063 PANTHER FI21118P1 222 1063 - -
Car07g01767 1063 MobiDBLite consensus disorder prediction 134 305 - -
Car07g01767 1063 ProSiteProfiles Zinc finger RanBP2 type profile. 414 443 IPR001876 -
Car07g01767 1063 SUPERFAMILY Ran binding protein zinc finger-like 410 444 IPR036443 -
Car07g01767 1063 CDD OCRE_SUA_like 608 660 IPR035623 -
Car07g01767 1063 SUPERFAMILY RNA-binding domain, RBD 466 553 IPR035979 GO:0003676
Car07g01767 1063 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 469 549 IPR000504 GO:0003723
Car07g01767 1063 ProSiteProfiles G-patch domain profile. 988 1034 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01767 Car-Chr7 18280041 18287825 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01767 311 533 Eukaryotic Initiation Factors Gene Family AT2G36660 25.498 7.81e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01767 K13094 - gmx:100787998 1672.91