Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01754 ATGTTGTGCCAAACCAAATTTAAAAACTCACGTCTAGGTAGCTCCTCTCTTATCACTAAAATGGAGAAAACAAGATCCTTAGATCAAGTTGTTCTCAACCTTGACCAACAACAACACAACCCTAAACCACCTTCCACCATGGACACCGAAACTCATCATGAAAATCCCAACCACCTCTCAAATATTAAAACTCTAAACCGTCTCAACTTCTCCAAACCCAAATCAAGAGTCCTTGAATACAACCATCCACATCTCAACAAACTACATACCTCCCAAGAAGACACTACTCAATTACCATCCTATAAGGTCTCTTCcgacgaggacgaagacgacgactataaatggaaggaagaagaaaccgatgaagacgacgacgacgacgaTGTTTCCCACGATCCAAAGTTACATAACAAAAAAAGAAAATTTAGGGTTAAATGGAGGCTAGTTTTTGAATGGATACTATTTTTAAACATATTAACATGTTTGGTTTGTTCTCTCATAATAAAAAACATAAAAAACATGCATTTATTAGGGTTAGAGATTTGGAGGTGGTGTTTAATGGCAATGGTAACATTTAGTGGGCGTTTATTTTCGGGTTGGTTAGTTAGTTTCACCGTTTTAATCATCGAAAGAAATTTCATGCTAAGAGAAAAAGTTTTATATTTTATCTACGGTTTAAGAAATAGTATACGTAATTGTTTATGGTTAAGTCTTGTTTTACTCTCTTATTGGAGTGTTGTTTTTGATGATGTCCAAAAGAAAAACCACAAGTTCCTTAACAAAGTGTTTCAAGCACTTGTTGCGGTTTTAGTTGGTGCAACCATTTGGTTAGTAAAAATTGTTTTAGTCAAAATGTTGGCTTCTTCATTTCATGTGACAACATATTTTGATAGAATGAAAGAGAGTGTTTTTCATCATTATGTTTTGGATGCATTGTCGGGACCAGCAATGGAAGATTGTGAAAAGATATTGAATGAACATGTTTTAAAGGGTTCGAAATCGATGCCGGCGGCCGGAACGGCGAGGTGGAAGAAGAAGATGAAGAATGTGAAGAGATTTGGTTCAAGGAGGATTGATATGGAGAAGTTGAAGAAACTTAGTATGGAGAGTAGTGTTTCAGCTTGGAGTGTTAAAAGGCTTGTTAATTATGTTAGGTATTCGGGTTTGTCAACTATTTCTAAAACGGTTAATGATTTTGGTAATGGTGAGAATGAGATTAGTAGTGAATGGGAAGCAAGAAGTTGTGCTCAAAAGATTTTCAACAATGTTGCTAAACCGGGTGCCAAGTATATTGAAGAGGTGGATCTGATGAGATTTTTGAAGAGGGTTGAGATACATACCATATTTCCACTCTTTGAAGGTGCTCTTGAAACTGGCAAGATAAGCAGGTCTTCCTTTAGAAATTGGGTGATTCGAGCTTATTATGAACGAAAAGTTCTAGCACAATCATTGAATGATACGAAAACAGCAGTGCAACAACTTCACAAACTAGCAAGTGGTGTTGTGAGTGTAATAATAATAATTGTGACCCTTTTGGTGATGGAAGTGGCGACACTAAAGATTATATTGTTCTGTATCACACAAACTGTTTTAATTGGGGTTGCATTCCAAGGCACTTGCAAAACTGTTTTGGAAGCCATCATCTTTGTCTTCATCATGCACCCTTTTGATATTGGAGACCGATGTGTCATTGATGGTATTCAGATGATTGTGGAAGAAATGAATATATTGACAACAGTGTTTCTTCGATATGACAATGAGAAAATATACTATCCTAATGCAGTCTTGCTATCCAAGCCAATAAGCAATTTTTATAGAAGTCCAGAGATGTGTGATGCAATTGATTTCACCATCGATGTGTCAACTCCTATTGAGACTATCATTGCTCTCAAGAAATCAATACAAATGTACATTGAGAGCAAGCCAAAGTACTGGAATCCAAAGCACAGTGTGATGGCAAAACAAATAGATAATGTGCACACATTAAAGCTATGTTTATGTGTTCAACACACCATTAACCATCAAAACTATGGTGAGCGAAGCACTAGGATATCAGAACTCCTATTGGAATTGAAAAAGATATTTGAAGTCCATGGTATCAAGTACCATCTTCTTCCTCAAGAAATTCATCTCACTCAAATGAATGTTGGAAATGGGAGAGTTCTGTTTTAA 2172 0.349 MLCQTKFKNSRLGSSSLITKMEKTRSLDQVVLNLDQQQHNPKPPSTMDTETHHENPNHLSNIKTLNRLNFSKPKSRVLEYNHPHLNKLHTSQEDTTQLPSYKVSSDEDEDDDYKWKEEETDEDDDDDDVSHDPKLHNKKRKFRVKWRLVFEWILFLNILTCLVCSLIIKNIKNMHLLGLEIWRWCLMAMVTFSGRLFSGWLVSFTVLIIERNFMLREKVLYFIYGLRNSIRNCLWLSLVLLSYWSVVFDDVQKKNHKFLNKVFQALVAVLVGATIWLVKIVLVKMLASSFHVTTYFDRMKESVFHHYVLDALSGPAMEDCEKILNEHVLKGSKSMPAAGTARWKKKMKNVKRFGSRRIDMEKLKKLSMESSVSAWSVKRLVNYVRYSGLSTISKTVNDFGNGENEISSEWEARSCAQKIFNNVAKPGAKYIEEVDLMRFLKRVEIHTIFPLFEGALETGKISRSSFRNWVIRAYYERKVLAQSLNDTKTAVQQLHKLASGVVSVIIIIVTLLVMEVATLKIILFCITQTVLIGVAFQGTCKTVLEAIIFVFIMHPFDIGDRCVIDGIQMIVEEMNILTTVFLRYDNEKIYYPNAVLLSKPISNFYRSPEMCDAIDFTIDVSTPIETIIALKKSIQMYIESKPKYWNPKHSVMAKQIDNVHTLKLCLCVQHTINHQNYGERSTRISELLLELKKIFEVHGIKYHLLPQEIHLTQMNVGNGRVLF 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01754 723 MobiDBLite consensus disorder prediction 84 132 - -
Car07g01754 723 MobiDBLite consensus disorder prediction 37 60 - -
Car07g01754 723 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 24 722 - -
Car07g01754 723 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 24 722 IPR016688 -
Car07g01754 723 SUPERFAMILY Sm-like ribonucleoproteins 546 604 IPR010920 -
Car07g01754 723 PIRSF Memb_At2g17000 5 721 IPR016688 -
Car07g01754 723 Gene3D - 555 604 IPR023408 -
Car07g01754 723 Pfam Mechanosensitive ion channel 500 701 IPR006685 GO:0016020|GO:0055085
Car07g01754 723 MobiDBLite consensus disorder prediction 110 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01754 Car-Chr7 18104253 18109813 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01754 42 715 Mechanosensitive Ion Channel Family AT5G12080 41.991 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01754 K22048 - gmx:100813521 1052.74