Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01750 ATGATGGAGTCTAATGAAAACCAGCGCGTTTCGGTTCGAGAGGTTTGTGCAAATGGAAATTGCATGAAAACAACCGAAGTTGAAGCTAAGCTTGATCAAGGAAATATTCAAGATGCAGAAACCGCATTGCGAGAAGGTTTGTCGCTTAGTTTTGAGGAAGCAAGATCTCTTCTCGGAAAATTAGAGTATCAAAGAGGTAATATTGAAGGTGCTCTTCGTGTGTTTGATGGGATTGATCTTAAAGCAGCCATACAGCGACTGCTACCTTCCCTTTCGGAAAAGACACCCGTCAAGAAAGGTCCCGCTCGTTCCGATTCACCCTCTTCAGTCTCTCAGCATGCCGCTAGTTTGGTGCTTGAAGCCATCTACCTAAAAGCCAAGTGTCTACAAAAACAAGGGAAATTTAATGAAGCTGTTAATGAATGCAAACATGTTCTTGATGCTGTTGAGAAGATATTCTCTCAGGGTATACCCGATACTCAAGTGGACAATAAATTGCAGGAGATAGTCAGCTGTGCAGTAGAGCTCCTTCCAGAGCTTTGGAAACAGGCCGGTTCCTATGACGAGGCAATGTCTTCTTATAGGCACGCGCTTCTTAGTCAATGGAACCTTGATAATGAATGCTGCGCAAGAATTCAAAAAGCATTTGCCGTGTTCTTGCTATACAGTGGTGTGGAGGCAAGTCCGCCTAGTTTTGCAGTTCAGATTGAAGGGTCTTATGTACCTAAAAGTAATCTAGAAGAGGCGATTCTTCTTCTTATGATTCTTTTGAGGAAGTTTAGCTTAGGTAAGATAAAATGGGATCCTTCAATTATGGAACACTTAACGTTTGCACTTTCGGCGTGTGGCCAAACTTCTATTTTGGCAAAGCAATTCGAAGAGTTGATGCCTGGTGTCTATCATCGTATTGACCGTTGGAATTCTATAGCTCTATGTCATAGTGGAGCTGGACAAAATAAAAGTGCTTTGAATCTCCTAAGGAAGTCTTTGCACAAGCATGAACGACCGGATGATGTTATAGCGTTGTTGTTGGCTGCAAGGATTTGCAGCGAGGATCCTCATCTTGCTGCCGAGGGATCAGAATATGCACAGAGGGCAATTGATAAAGCTCATGGCTTAAATGAGCATTTGAAAGGTGTTGGTCTCCGGATGCTAGGACTTTGCCTTGGAAAGCAAGCTAATGCTGCTACATCCGATTTCGAAAGGTCTATGCTTCAGTCGAAAGCTTTGGAATCATTGGAGGAGGCAGTTAGATTAGAGCAAAACAATTTTGATCTAATTTTTGAATTGGCTATTCAATATGCTAAGCATCGAAATTTGGCTGTTGCTTTACGCTATGCCAAGCAGTTCTTCGACAAAACTGGTGGCTCCAAATTGAAAGGTTGGAGATTGCTTGCTCTGGTTTTGTCTGCACAGAAAAGATTTTCAGAGGCTGAAGTGGTGACTGATGCTGCTGTAGACGAGACCGCAAAATGGGAGCAGGGGCCTCTATTCAGACTAAAAGCCAAGCTGAAGATCTCCCAATTACGACCTATGGATGCGATTGAGATTTACCGGTACCTTCTTGCATTGGTTCAAGCCCAGAAGAAATCCTTTGGACCTCAAACACTTAGTTCACAGGACGAGGATGATAAAATAAGTGAATTTGATGTTTGGCATGGTCTAGCAGATTTATATGCAAGCCTTTCACATTGGAAAGATGCTGAAATCTGTTTGCAAAAGGCTAGAGAGTTGAAGGAATACTCGGCAGCAACAATACAAACCGAAGGTGTCGTGTTTGACGGTCGTGGAAAAAACGACGAAGCTCTTGCTGCTGCGGCTAATGCTGTCATGGTTGAACCAAACCATGTTCCAAGCAAGATCTTGATGAGTTCTTTGATGCTTAAAATGGGTTCCAAAGCATTACCTGTTTCAAGGAGCTTACTTTCTGATGCACTTAGAATAGAACCGGCTAATCGCATGGCTTGGTATTATTTAGGATTAACTCACAAGGATGACGGTCGAATAAACGATGCTGCTGACTGCTTCCAAGCAGCTTCCATGCTTGAAGAATCTGATCCCATTGAAAGCTTCAGCTCTATGCTTTGA 2088 0.4296 MMESNENQRVSVREVCANGNCMKTTEVEAKLDQGNIQDAETALREGLSLSFEEARSLLGKLEYQRGNIEGALRVFDGIDLKAAIQRLLPSLSEKTPVKKGPARSDSPSSVSQHAASLVLEAIYLKAKCLQKQGKFNEAVNECKHVLDAVEKIFSQGIPDTQVDNKLQEIVSCAVELLPELWKQAGSYDEAMSSYRHALLSQWNLDNECCARIQKAFAVFLLYSGVEASPPSFAVQIEGSYVPKSNLEEAILLLMILLRKFSLGKIKWDPSIMEHLTFALSACGQTSILAKQFEELMPGVYHRIDRWNSIALCHSGAGQNKSALNLLRKSLHKHERPDDVIALLLAARICSEDPHLAAEGSEYAQRAIDKAHGLNEHLKGVGLRMLGLCLGKQANAATSDFERSMLQSKALESLEEAVRLEQNNFDLIFELAIQYAKHRNLAVALRYAKQFFDKTGGSKLKGWRLLALVLSAQKRFSEAEVVTDAAVDETAKWEQGPLFRLKAKLKISQLRPMDAIEIYRYLLALVQAQKKSFGPQTLSSQDEDDKISEFDVWHGLADLYASLSHWKDAEICLQKARELKEYSAATIQTEGVVFDGRGKNDEALAAAANAVMVEPNHVPSKILMSSLMLKMGSKALPVSRSLLSDALRIEPANRMAWYYLGLTHKDDGRINDAADCFQAASMLEESDPIESFSSML 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01750 695 Gene3D Tetratricopeptide repeat domain 24 203 IPR011990 GO:0005515
Car07g01750 695 Gene3D Tetratricopeptide repeat domain 278 453 IPR011990 GO:0005515
Car07g01750 695 PANTHER PROTEIN NPG1 2 694 IPR043376 -
Car07g01750 695 ProSiteProfiles TPR repeat profile. 653 686 IPR019734 GO:0005515
Car07g01750 695 PANTHER CALMODULIN-BINDING PROTEIN 2 694 - -
Car07g01750 695 Gene3D Tetratricopeptide repeat domain 460 690 IPR011990 GO:0005515
Car07g01750 695 SUPERFAMILY TPR-like 52 198 IPR011990 GO:0005515
Car07g01750 695 SUPERFAMILY TPR-like 503 683 IPR011990 GO:0005515
Car07g01750 695 Pfam Tetratricopeptide repeat 28 76 - -
Car07g01750 695 SMART tpr_5 119 152 IPR019734 GO:0005515
Car07g01750 695 SMART tpr_5 653 686 IPR019734 GO:0005515
Car07g01750 695 SMART tpr_5 303 336 IPR019734 GO:0005515
Car07g01750 695 SMART tpr_5 459 492 IPR019734 GO:0005515
Car07g01750 695 SMART tpr_5 583 616 IPR019734 GO:0005515
Car07g01750 695 SMART tpr_5 549 582 IPR019734 GO:0005515
Car07g01750 695 SUPERFAMILY TPR-like 119 444 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01750 Car-Chr7 18058610 18063420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01750 12 695 Calmodulin-binding Proteins AT2G43040 70.160 0.0 967
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01750 K21843 - gmx:100811897 1145.95