Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01749 ATGGTTAAGCATAATAATGTGATCCCTAATGAGCACTTTCGGAAGCATTGGCAAAACTATGTCAAGACTTGGTTCAATCAACCAGCTCGGAAGACAAGAAGACGGTTAGCTCGGCAGAAGAAGGCTGTTAAGATTTTTCCGAAGCCTACAGCTGGGCCTCTTAGACCTATTGTTCATGGTCAGACAGTTAAATACAACATGAAACTCAGATCAGGGAAAGGGTTTTCTCTAGAAGAACTTAAGGCTGCTAATATTCCTAAAAAGCTTGCTCCAACTATTGGCATTGCTGTTGATCATCGCCGTAGGAATCGTTCTTTGGAAAGTCTACAAACTAATGTCCAGCGGCTGAAAACATATAAGGCCAAATTGGTCGTGTTCCCAAGACGGGCTCGCAAGGTCAAGGCTGGTGATTCTAGTCCCGAGGAACGCGCAAATGCCACACAAGTGCAGGGTTCATACTTGCCCATTGTGACGGAGAAGCCATCTGTTGAGCTTGTTAAGGTTACAGATGAAATGAAGGCATTCAAAGCGTATTATAAACTTCGTCTTGAACGAACTAATCAACGCCATTTTGGTGCCCGACTAAAGAGAGCTGCTGAGGCAGAAAAGGAAGACAAAAAATAG 624 0.4391 MVKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPKPTAGPLRPIVHGQTVKYNMKLRSGKGFSLEELKAANIPKKLAPTIGIAVDHRRRNRSLESLQTNVQRLKTYKAKLVVFPRRARKVKAGDSSPEERANATQVQGSYLPIVTEKPSVELVKVTDEMKAFKAYYKLRLERTNQRHFGARLKRAAEAEKEDKK 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01749 207 PANTHER 60S RIBOSOMAL PROTEIN L13 1 207 IPR001380 GO:0003735|GO:0005840|GO:0006412
Car07g01749 207 Hamap 50S ribosomal protein L13e [rpl13e]. 45 128 IPR001380 GO:0003735|GO:0005840|GO:0006412
Car07g01749 207 Gene3D - 167 207 - -
Car07g01749 207 PANTHER 60S RIBOSOMAL PROTEIN L13 1 207 - -
Car07g01749 207 Pfam Ribosomal protein L13e 7 185 IPR001380 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01749 Car-Chr7 18043779 18046323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01749 2 192 Cytoplasmic Ribosomal Protein Gene Family AT3G49010 84.293 6.01e-123 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01749 K02873 - gmx:100805957 367.466