Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01748 ATGTCTGATAATGGTAAGGAACCTTTGTTCAGTGGCAAATTTGGTGTGTTACTAATTGCCATGGGTTCAGCTAGTTTTGTGGTAACATTGTACCATGTCATAGTCATTTGCTGCCAAAACTCGACCGAACAACCTGCGGCACAAACGGCGAGCGTCGAAGAGGGAAGTTTAGTTTCTCATGAGATTCCATCACACAAGTATGAGAAGAAAAATAATGATGATGATTGTGTGACTTGTGCTGTGTGCTTGGGAGAGTTTGAGGAGGGTGAGGAGTTGAGGACTATGCCTTCTTGTATGCACTCTTTTCACGTACCATGCATAGATATGTGGCTCATTTCACATCTCAATTGCCCTGTTTGCCGCGCTGATGCCACGCCCTCTCCCGTGAATGTTGTTGTTGATCATAGCATAGATATGGTGCAAATACTTGTCACTCACAACGAGTTGCAAAGTGGGTTACCGTGA 465 0.4452 MSDNGKEPLFSGKFGVLLIAMGSASFVVTLYHVIVICCQNSTEQPAAQTASVEEGSLVSHEIPSHKYEKKNNDDDCVTCAVCLGEFEEGEELRTMPSCMHSFHVPCIDMWLISHLNCPVCRADATPSPVNVVVDHSIDMVQILVTHNELQSGLP 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01748 154 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 55 128 IPR013083 -
Car07g01748 154 ProSiteProfiles Zinc finger RING-type profile. 79 121 IPR001841 -
Car07g01748 154 PANTHER CHROMATIN REGULATOR PHD FAMILY-RELATED 3 142 - -
Car07g01748 154 SUPERFAMILY RING/U-box 60 127 - -
Car07g01748 154 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 3 142 IPR044675 -
Car07g01748 154 SMART ring_2 79 120 IPR001841 -
Car07g01748 154 Pfam Ring finger domain 78 121 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01748 Car-Chr7 18042533 18043184 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01748 62 152 C3H Transcription Factor Family AT3G03550 45.055 6.07e-21 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01748 - - gmx:100809606 160.614