Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01742 ATGAAGTGTACAAGAATGGACCAACTGTTAAGTCTTGTAATATGTACACTGCTTTTATTACTAAAGGCAGAAGGAGTTGCTGTGCCAATCACTTATGTTCAAAGTGCAGTGGCAAAAGGAGCTGTTTGTTTGGATGGAAGTCCACCAGCTTACCACTTTGATAAAGGAGTTGGAGCTGGAATTGACAATTGGATTGTTCACTTTGAGGGAGGAGGATGGTGCAACAATGTCTCTACTTGCCTCGATCGTAGGGACACTCGTTTAGGATCATCGAAGAAAATGGATAAGCAACTTTCATTTTCTGGATTTTTCAGTAACGGCAAAAAGTTTAATCCAGATTTCTATGATTGGAACAGAATCAAGGTTAGGTACTGTGATGGCGCATCATTTACCGGCGATGTTGAAGCTGTCGATCCAGCAACCAATTTGCACTTCAGAGGAGCAAGGATTTTTGTTGCTGTCATTGAAGATTTACTAGCAAAAGGAATGAAAAATGCTAAAAATGCAATTCTCTCTGGATGTTCAGCTGGAGGATTGACTTCGATTTTACAATGCGATCGCTTCAAAACTCTTTTACCTGCAGCAGCTAAAGTGAAATGTGTTTCAGATGCTGGTTATTTTATCAATGTAAAGGCTGTTTCTGGAGCACAACACATTGAACAATTCTACAGTCAAGTTGTTCAAACACATGGCTCAGCGAAGAATTTACCTCAGTCTTGCACTTCAAGACTCTCACCAGGGCTGTGCTTTTTTCCGCAAAATGTGGCAGCGCAAATTAAAACACCGATTTTCTTTGTAAATGCAGCCTATGATTCATGGCAGATTAAGAACATTTTGGCACCAGGTGTTGCTGATCCTCATGGCACTTGGCGTAACTGCAAGCTTGATATAAACAATTGTTCACCTAATCAATTAACTACAATGCAAGGTTTCAGGACACAATTCTTGCAGGCAATTAGTGGGCTTAGTAACTCTCCATCTAAAGGATTGTTTATAGATGGTTGCTATGCTCACTGCCAAACTGGAATGCAGGAAACATGGATGAGAAGTGACTCTCCAGTTCTGGCCAATACTACAATAGCAAAGGCTGTGGGAGATTGGTATTATGACAGAAAGACTTTTCATCAGATAGATTGTCCTTACCCTTGCAACCCTACTTGCCATAACCGTGTTTTTGATCAAAACAAGCTACCAGAATTTTAG 1203 0.4048 MKCTRMDQLLSLVICTLLLLLKAEGVAVPITYVQSAVAKGAVCLDGSPPAYHFDKGVGAGIDNWIVHFEGGGWCNNVSTCLDRRDTRLGSSKKMDKQLSFSGFFSNGKKFNPDFYDWNRIKVRYCDGASFTGDVEAVDPATNLHFRGARIFVAVIEDLLAKGMKNAKNAILSGCSAGGLTSILQCDRFKTLLPAAAKVKCVSDAGYFINVKAVSGAQHIEQFYSQVVQTHGSAKNLPQSCTSRLSPGLCFFPQNVAAQIKTPIFFVNAAYDSWQIKNILAPGVADPHGTWRNCKLDINNCSPNQLTTMQGFRTQFLQAISGLSNSPSKGLFIDGCYAHCQTGMQETWMRSDSPVLANTTIAKAVGDWYYDRKTFHQIDCPYPCNPTCHNRVFDQNKLPEF 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01742 400 Pfam Pectinacetylesterase 22 373 IPR004963 GO:0016787
Car07g01742 400 PANTHER PECTIN ACETYLESTERASE 3 395 - -
Car07g01742 400 PANTHER NOTUM-RELATED 3 395 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01742 Car-Chr7 17988282 17993913 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01742 5 392 Carbohydrate Esterase AT4G19420 59.338 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01742 K19882 - gmx:100781246 677.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01742 07 17988282 17993913 Car08g00828 08 7425548 7431425 PCT