Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01708 ATGATTTCCGATCTTCACTCTTCTTCAATCGAAGACCAGAAACAAGCCGCCATGGAAATTCAATTAATCGCTAAAAATAAACCAGAAAATCAAATCAGAATCGCAAAAGTCGGCGCAATTAAACTGTTAATTTCACTCGTTTCTTCGCAAGACCTACAACTTCAAGAATACGGTGTCACCTTGATTTTGAATATCTATTTATGCGACGAGAATAAAGAGTTCATAGCTTCTTTTGGAGCGATTAAGCCTCCAGTTAGAGTCTCAAACTTGGGAACttcgacgcaacAGGATGGAACAATTGCAAAAATTATGAGAAACCGCCAGAATAATTTCCTGATGGAGAGTAATGTAGAACGTAATATGAATGCTCTGGCAGCTGGAAGGATTGCATGCATTGATCCATTAATTAGAACAGATAAACCGAAGATGCATTCACATTGTTAA 444 0.3649 MISDLHSSSIEDQKQAAMEIQLIAKNKPENQIRIAKVGAIKLLISLVSSQDLQLQEYGVTLILNIYLCDENKEFIASFGAIKPPVRVSNLGTSTQQDGTIAKIMRNRQNNFLMESNVERNMNALAAGRIACIDPLIRTDKPKMHSHC 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01708 147 SUPERFAMILY ARM repeat 4 83 IPR016024 -
Car07g01708 147 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 4-LIKE ISOFORM X1 2 136 - -
Car07g01708 147 Gene3D - 1 137 IPR011989 -
Car07g01708 147 PANTHER U BOX DOMAIN-CONTAINING 2 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01708 Car-Chr7 17527416 17528088 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01708 1 104 U-box Gene Family AT2G23140 39.423 2.11e-17 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01708 - - gmx:100797550 146.362