Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01706 ATGAGTGGTAGAATGTTGAAAGGAGATTCGTCAATAAACTCCAATGAAAATGAAAACTCCACTTCTAATCTTCCTTTGGACGCCCCTCCAACAATCTTCTCTCCTCCATCACCACCATTTCCATCTCTAAACGATGAAGCTTCCGATTACATCTATTTAACGGAAGCTTTGGCTCCCTATAAAAATTATTACACTACTGAATGGGATGAAATGTTCGAAAATGTCAAATCACCTATATGTGATGATATCTCAAATTATTTCTTCAACCCTCTCAAGCCATTGCTACCACTAGATGTTATCTATCCCACAATTCTTTCACCACTAACAAAAACACAAACCCTTCTTCTTAACCACCATGACACACCGATATTGCTTGATTCACCTCCCAGTCAAGCTATTGTCACCCCTCCTCCACCTCATACTCCAATCGTTGGTGGTGAGTTTGACGACCAAGTCTTGGTCATCAACCCTCCTTCAACTTTATCATCTACAACAAATCATGACGCTGAAATTGAAAAATCAACATCATTGACACTTGATGCATCTCTCAAACCGACTAAATCTACCCGACCTAAGAAGGTTCAACGCACATTTAAGACGAGTTCTAAATCGGATGCTTTAACAACACCATTGGAAGAGTCTCAAAACACCATTGTGAATCCCTTAGCTTGCACCCAACAAATGACAGCAACTTCCCAAGATCAGACAATGTCCCAATTTTCAACTCTAATAACAAAGAAGGAATTTCTTAAGTCAGCAATTATCAAAGTAGATCACAATGAGGATGTTGCGGAGAGAATAATATCATTTGCTAAAGAAAGAGGATATGTTTGCATCTGTGGAACTGTTGGCAGCTTATCTCTTGTTGAACTACTACAACAACAAAAAATCGTAACTTTTGAGGGAAATTTTAACATTATAAATTTGAAAGGTTCTTTAATTTATCCTAAAAATGGTGACCCTATGAAGGGTCAACTTTCTATTACACTTGCTGGAAATGATGGTAAGGTTTTTGGAGGAGTTGTGCATGGACGCTTAATTGCTCAATCCACCGTTCAGATGAGTGGTTTTGTCTCGACTTCAGTTAAAGTCAATAAAACACAAAACAAGCAGCGAAAGGCCCAACCATGA 1131 0.3855 MSGRMLKGDSSINSNENENSTSNLPLDAPPTIFSPPSPPFPSLNDEASDYIYLTEALAPYKNYYTTEWDEMFENVKSPICDDISNYFFNPLKPLLPLDVIYPTILSPLTKTQTLLLNHHDTPILLDSPPSQAIVTPPPPHTPIVGGEFDDQVLVINPPSTLSSTTNHDAEIEKSTSLTLDASLKPTKSTRPKKVQRTFKTSSKSDALTTPLEESQNTIVNPLACTQQMTATSQDQTMSQFSTLITKKEFLKSAIIKVDHNEDVAERIISFAKERGYVCICGTVGSLSLVELLQQQKIVTFEGNFNIINLKGSLIYPKNGDPMKGQLSITLAGNDGKVFGGVVHGRLIAQSTVQMSGFVSTSVKVNKTQNKQRKAQP 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01706 376 ProSiteProfiles PPC domain profile profile. 247 376 IPR005175 -
Car07g01706 376 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 184 370 IPR039605 GO:0003680
Car07g01706 376 Gene3D - 251 375 - -
Car07g01706 376 CDD DUF296 254 353 IPR005175 -
Car07g01706 376 MobiDBLite consensus disorder prediction 186 212 - -
Car07g01706 376 MobiDBLite consensus disorder prediction 1 38 - -
Car07g01706 376 SUPERFAMILY AF0104/ALDC/Ptd012-like 250 355 - -
Car07g01706 376 Pfam Plants and Prokaryotes Conserved (PCC) domain 253 354 IPR005175 -
Car07g01706 376 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01706 Car-Chr7 17493919 17498499 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01706 254 354 AT-hook Motif Nuclear Localized (AHL) Family AT5G51590 36.449 3.43e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01706 - - mtr:MTR_8g072860 91.6633