Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01705 ATGATGGAGGAAGTTGTTCCTTTCTTTCGGTCTGTAAGGTTGCCGCAATCTGCTACGACAGAAGAGGACTGCGTGGTTGAGATGGCCAAATCGGTGAAGGAACAACTGGGGAGATGCATTACTAGTGTTGTTTTGATGAGAGATGCAGATGGTAGGTCAAAGTGTTTTGGTTTTGTCAATTTCGAAAATCCAGACAATGTTGCTAATGTTGTGGAGGCATTGAATGGGTGTCTTGATTTTGATTCTGAGAATAGTGGGCATCCTGATTCTGGGAATAGTGGTCGCATAGATTGTGGTGTCCTTAGGAAGTGGACCGTGGGATCAGATTTTTGA 333 0.4414 MMEEVVPFFRSVRLPQSATTEEDCVVEMAKSVKEQLGRCITSVVLMRDADGRSKCFGFVNFENPDNVANVVEALNGCLDFDSENSGHPDSGNSGRIDCGVLRKWTVGSDF 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01705 110 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 40 79 IPR000504 GO:0003723
Car07g01705 110 PANTHER POLYADENYLATE-BINDING PROTEIN 21 78 - -
Car07g01705 110 SUPERFAMILY RNA-binding domain, RBD 40 78 IPR035979 GO:0003676
Car07g01705 110 Gene3D - 12 88 IPR012677 -
Car07g01705 110 Pfam Reversibly glycosylated polypeptide 1 39 IPR037595 -
Car07g01705 110 PANTHER RNA BINDING PROTEIN 21 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01705 Car-Chr7 17454636 17454968 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01705 40 76 Eukaryotic Initiation Factors Gene Family AT2G23350 70.270 1.55e-13 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01705 K13126 K13379 han:110886321 69.3218