Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01696 ATGACTCGCATACTCCGAAACTTGCTATCCACACCCGACTCCGCCGCACCGCCACCGGAGTCCGCCGCATCCTTAGAATCCGACTTCGTCGTCATCCTTGCAGCTCTCTTATGCGCTCTCATATCCGTCGTGGGTCTCACCGCTATCGCCAGATGTGCTTGGCTCCGCCGTGGGCCCGTTGCCGGAAACTCGCCGGCGCCTGGCTCCGCCAACAAAGGTCTCAAGAAAAAGGTTCTGAACTCGCTTCCTAAGTTTACCTACCTCGACGGTAGTCCTGGAAAGTGGGTTGTCTCGTCGGAGTGCGCCATTTGCCTCTCGGAGTTTACCGCCGGCGAAGAGGTTCGTGTATTACCTCAGTGCGGTCATGGATTCCACGTGGCATGTGTAGACACGTGGCTTGGGTCCCACTCTTCTTGCCCCTCTTGCCGTGCTCCCTTTGCAATCGCCAGGTGTCAGAAATGCGGCCTCTACCAGCCGAATTCTGCCGGTGCCGTCGCCGGTGAGACGGAGCCAAAGTCCGTCGGCGGCGACAATGCCGAAGTTGCTAATAATTCTAATTGTGTCGGTAATAGTGTTGAAAGTCATAGCCACACTGTTTATAATGGCTTCTTGCCTTAA 618 0.5599 MTRILRNLLSTPDSAAPPPESAASLESDFVVILAALLCALISVVGLTAIARCAWLRRGPVAGNSPAPGSANKGLKKKVLNSLPKFTYLDGSPGKWVVSSECAICLSEFTAGEEVRVLPQCGHGFHVACVDTWLGSHSSCPSCRAPFAIARCQKCGLYQPNSAGAVAGETEPKSVGGDNAEVANNSNCVGNSVESHSHTVYNGFLP 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01696 205 ProSiteProfiles Zinc finger RING-type profile. 101 143 IPR001841 -
Car07g01696 205 CDD RING-H2_PA-TM-RING 100 143 - -
Car07g01696 205 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 1 190 - -
Car07g01696 205 SUPERFAMILY RING/U-box 81 148 - -
Car07g01696 205 SMART ring_2 101 142 IPR001841 -
Car07g01696 205 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 1 190 - -
Car07g01696 205 Pfam Ring finger domain 100 143 IPR001841 -
Car07g01696 205 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 148 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01696 Car-Chr7 17325372 17326418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01696 1 154 C3H Transcription Factor Family AT1G20823 60.241 2.25e-59 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01696 - - cam:101497131 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00766 08 6733952 6734982 Car07g01696 07 17325372 17326418 PCT