Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01691 ATGATCAGAGTTTGGCTTGTGATGTTGATGGTTCTCTCCAATTTGTTGTTCTCTTCAAGTGGTGTTGGTTTGGATAATTCCACAGTACCTCCTGCATTTGTAAATATTGGGGTTCTTTACTCTTTCAATACCAGTGTTGGTAGAATAGTGAAAATTGCTGTAGAAGCTGCAGTTAAAGATATAAATTCTGATCCTTCTATTCTTGGTAAAACTAAGTTGAAGCTCTCACTACAGGAAGATTCGAAATACCGAGGCTTTTTGAGCATCGCCGAGGCTTTGCAGCTTATGGCAACGCGCACTGTGGCTATTATCGGTCCGCAGACTTCGACAACAGCTCATGTCATATCTCATATAGCAAATGAGCTCCACGTACCTCTGCTATCATTTTCAGCGACGGATCCTACTCTTTCTTCGCTTCAATTCCCATTCTTTATTAGAACTGCTTTCAGTGACATTTTTCAAATGACTGCTATAGCAGACATTGTTAACCACTATGGTTGGAGAGAGGTTATTGCAGTCTACGGCGATGACGACCATGGGAGGAATGGCATAGGTGCGTTAGGGGATAAGCTAGCTGAGAGACATTGCAAGATTTTGTTTAAAGCACCGATGACTCCTGAGGCAAATAGGGAGGAGATTACCGATGTGCTTGTTCAGGTGGCGTTGGCAGAATCTCGGGTTATAGTTCTTCACACAAGTACTGCTTGGGGTCCAAAAGTGTTGAGTGTGGCAAAGTCTCTTGGAATGATGCAAAATGGTTATGTCTGGATTGCTACTAATTTTCTATCGTCTTTTCTGGACATCGATAGTCCACTTTCGTCAGATGAAATGGATAACATTCAAGGAGTTATTACATTAAGAATGTACATACCGGATTCGAAGCTCAAAAGATCGTTCGTTTCTAGGTGGGCAAATTTGACTAGTGGAAAGACTGCAAATGGTCCTCTTGGTCTTAGTACTTATGGTATATTTGCGTATGATACTGTTTATGTGCTTGCGCGTGCCCTTGATACATTTCTGAAACAAGGGAACCAAATTACATTTTCGCACGATCCAAAGTTAACTGAACTACACGGAGACAGCATGCATCTTGATGCTGTGAAAATCTTCAATGAAGGAAATCTTTTGTGTAAAAGTATTTATGAGGTTAACATGACTGGTGTAACAGGTCCATTCAGGTATACACATGATGGAAACCTTGCTAATCCAGCATATGAAATCATCAATGTGATTGGAACCGGGACTCGGAGGATTGGTTATTGGTCTAATTACTCTGGATTATCGGTTGTTCCTCCAGAAGAACTTTACTCAAAACTGCCTAATCGTTCGAGCGAAAATCAAAAGCTACTCACTGTGTTTTGGCCAGGAGAAACAACCCAGAGACCTCGAGGTTGGGTTTTTCCAAACAATGGAAAGCTCTTAAAAATTGGAGTACCGAAAAGGTTTAGTTACCGCGAATTTATTTCCCAGGTACAATCTACTGACACGTTCAAGGGATTCTGCATTGATGTATTTCTTTCTGCGGTAAACCTGTTGCCCTATGCGGTCCCCTATAAGTTTGTTCCATATGGTGATGGTCGAAACAATCCTAGTAACACCGAGCTTGTGCGTCTGATCACGGCCGGCGTCTTTGATGCTGCAGTAGGTGACATTACAATTACTACAGAAAGAACAAAGATGGTAGATTTTACTCAGCCATATATTGAGTCTGGTTTAGTGGTAGTAGCATCAGTTAAGAAGACAGATTCCAATGCTTGGGCATTTCTGACACCATTTACACCAATGATGTGGACTGTAACAGCTATCTTTTTCCTACTAGTTGGTGCAGTAGTTTGGATTCTAGAACATAGAATGAATGATGATTTTAGAGGACCACCTAAAAAACAATTAGCCACAATTTTGTGGTAA 1908 0.4114 MIRVWLVMLMVLSNLLFSSSGVGLDNSTVPPAFVNIGVLYSFNTSVGRIVKIAVEAAVKDINSDPSILGKTKLKLSLQEDSKYRGFLSIAEALQLMATRTVAIIGPQTSTTAHVISHIANELHVPLLSFSATDPTLSSLQFPFFIRTAFSDIFQMTAIADIVNHYGWREVIAVYGDDDHGRNGIGALGDKLAERHCKILFKAPMTPEANREEITDVLVQVALAESRVIVLHTSTAWGPKVLSVAKSLGMMQNGYVWIATNFLSSFLDIDSPLSSDEMDNIQGVITLRMYIPDSKLKRSFVSRWANLTSGKTANGPLGLSTYGIFAYDTVYVLARALDTFLKQGNQITFSHDPKLTELHGDSMHLDAVKIFNEGNLLCKSIYEVNMTGVTGPFRYTHDGNLANPAYEIINVIGTGTRRIGYWSNYSGLSVVPPEELYSKLPNRSSENQKLLTVFWPGETTQRPRGWVFPNNGKLLKIGVPKRFSYREFISQVQSTDTFKGFCIDVFLSAVNLLPYAVPYKFVPYGDGRNNPSNTELVRLITAGVFDAAVGDITITTERTKMVDFTQPYIESGLVVVASVKKTDSNAWAFLTPFTPMMWTVTAIFFLLVGAVVWILEHRMNDDFRGPPKKQLATILW 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01691 635 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 108 136 - -
Car07g01691 635 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 47 63 - -
Car07g01691 635 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 325 337 - -
Car07g01691 635 SUPERFAMILY Periplasmic binding protein-like I 31 466 IPR028082 -
Car07g01691 635 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 11 635 - -
Car07g01691 635 Gene3D - 150 427 - -
Car07g01691 635 Gene3D - 474 584 - -
Car07g01691 635 SMART GluR_14 475 635 IPR001320 GO:0015276|GO:0016020
Car07g01691 635 Pfam Receptor family ligand binding region 51 412 IPR001828 -
Car07g01691 635 Gene3D - 585 633 - -
Car07g01691 635 PANTHER GLUTAMATE RECEPTOR 11 635 - -
Car07g01691 635 SUPERFAMILY Periplasmic binding protein-like II 449 601 - -
Car07g01691 635 CDD PBP1_GABAb_receptor_plant 35 431 IPR044440 -
Car07g01691 635 Pfam Ligated ion channel L-glutamate- and glycine-binding site 489 577 IPR019594 GO:0004970|GO:0016020
Car07g01691 635 Gene3D - 52 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01691 Car-Chr7 17234595 17240405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01691 5 635 Ion Channels AT3G51480 55.433 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01691 K05387 - gmx:100788917 1084.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00761 08 6692071 6697707 Car07g01691 07 17234595 17240405 PCT