Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01689 ATGCTGCTTATGATTCATGGCAGATCCAATCTAGCCACAAAACCAATTTCTGCAAGGAATCACATGCTGAATTCTGCTAAAGATTTCTCAAGATCAAAACATAATGGACTGTTTATTAATTCGTGTTTTGCGTACTGCCAAACCGAGAGGCAGGATACATGGTTTTCAGATAATTCTCCAGCTGTTGGGAACAAGGTAATTGCTTTAGCTGTTGGAGACTGTGCGAAAGTACTTAATCTTGACAATGGAGTAGAGATATCAAAACGTAGGTCAGGTTCACTTCACACTTTTCGCAGCCGTTGGATACTTGGATCTGTCTCTCCACAACAATTCATCACTGTTGCTAATGCCATTGATGCTGCAAAGCAATGGGACTCTGATTTGGTGGAAGCAAGATACATAAAAGAAATTGAAGACAACCTCAGCATAATTCGTCTTAGGTTTGGAGATAACTCCAAGCCACTGTTCAGGAATAGAGAATTCATTGTCTATGAGCGACGTCAAACTATGGAAGATGGCACTGTGGTAGTAGCAGTTGCTTCATTGCCAAAGGAAATAGCTGCTGGATTACATCCTAAGCAAAATAATGCAATAAGAGGACTATTGCTACACTCAGGATGGGTAGTGGAGAAGCTTCAAGATAATTCATGTGTTGTTACTTATGTTGTTCAGTTGGATCCTGCAGGGTGGCTTCCCAAGTGTTTTGTGAATCGATTTAATACAAAACTGGTTATGATTATTGAAAATCTTAGAAAATTAGCACAAGCATGTCCAAGTGGTCAAAATTGA 789 0.3967 MLLMIHGRSNLATKPISARNHMLNSAKDFSRSKHNGLFINSCFAYCQTERQDTWFSDNSPAVGNKVIALAVGDCAKVLNLDNGVEISKRRSGSLHTFRSRWILGSVSPQQFITVANAIDAAKQWDSDLVEARYIKEIEDNLSIIRLRFGDNSKPLFRNREFIVYERRQTMEDGTVVVAVASLPKEIAAGLHPKQNNAIRGLLLHSGWVVEKLQDNSCVVTYVVQLDPAGWLPKCFVNRFNTKLVMIIENLRKLAQACPSGQN 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01689 262 SUPERFAMILY Bet v1-like 81 255 - -
Car07g01689 262 Pfam START domain 106 239 IPR002913 GO:0008289
Car07g01689 262 Gene3D - 73 257 IPR023393 -
Car07g01689 262 CDD START 82 256 - -
Car07g01689 262 PANTHER PHOSPHATIDYLCHOLINE TRANSFER PROTEIN 76 258 - -
Car07g01689 262 Pfam Pectinacetylesterase 18 73 IPR004963 GO:0016787
Car07g01689 262 PANTHER EXPRESSED PROTEIN 76 258 - -
Car07g01689 262 ProSiteProfiles START domain profile. 50 237 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01689 Car-Chr7 17204236 17207812 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01689 6 73 Carbohydrate Esterase AT5G26670 58.571 6.62e-20 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01689 - - mtr:MTR_4g134400 352.058