Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01679 ATGGGTCTCTGCTTTTGCTCTCTCTGTCCCTCCTCTATACCTCCATCCTCTTCCTCCTTCAACAAACCTCTCTCCTCAGGCAACACTGTTGGATTCTCTGCAACTACAAGCAGTGCTGGAAGGAGTCAATTTTCTGAGATAACAAGTGGAAGCATTGAGGATACAACTGAAGGGTCTCTTTCTTTTCATTCTCCAAATGGTGAAATTCTTGAAAGGCCAAATTTGAAGGTTTTTAGTTTTGTTGACTTGAAATCTGCTACAAGAAATTTCAGACCTGATACATTACTTGGTGAAGGTGGTTTTGGAAGAGTTTATAAAGGTTGGTTGGATGAGAAAAATCTTACTCCTGCTAAACCTGGCTCTGGAATCATGGTTGCCATCAAAAAATTGAACTCTGAAAGTACTCAAGGCTTTCAAGAATGGCAGGCGAaagtgaactttttaggaaggctttctcacccaaacttggtgaaactattgggttactgttgggatgatgaagagcttcttcttgtgtatgagttcatggcaaaGGGTAGTTTGGAGAATCATCTCTTCAGAAGAAATCCTAACATTGAACCACTTTCttggaacacaagaatcaaaatagctattggtgcagctaggggtttggctttcttgcatgattcagaaaagcaagtcatttacagagattttaaggcctcaaatatactacttgatgGGAGTTTCAATGCAAAAATTTCAGATTTTGGATTAGCTAAATTGGGGCCTTCAGGGGAACAATCACATGTAACTACGAGGGTGATGGGCACATATGGTTATGCTGCTCCAGAATACATTGCAACAGGGCACTTATATGTGAAGAGTGATGTGTATGGGTTTGGAGTAGTATTGCTAGAAATGCTGTCAGGAATGAGAGCATTGGACAGAACAAGACCACCAGGGCAACAAAACTTAGTTGAATGGGGGAAACCTCTTCTATCAAATAAGAAGAAATTGAAAAACATAATGGATGGTAAAATAGAAGGACAATACTCACAAAAAGCAGCTATACAAGCAGCACAACTTTCTCTAAAATGCTTAGAAAATGATCCTAAACAACGTCCTTCTATGAAAGATGTACTTGAGTCATTGGAAATTATTGAAGCCATTCAAGTCAAATCCAAAAACCACATTTCTCGTCATCAACCTCCAATTCATCATGATACCATGGCCTTGAATGTTGATGATGTGTTATACTGCTATTACAATCCAGATAAAGAAGACTTTGGAGGTTTGGTTAGGAACTGTTACAAGAAACTGTTATATTTTTCAGACTCTTTACATGTTGTGCAATTGGGGACTATTGGTAAAAATAGATTTCATCATGCCAACATTTTGGTGGCTATTTAG 1374 0.3261 MGLCFCSLCPSSIPPSSSSFNKPLSSGNTVGFSATTSSAGRSQFSEITSGSIEDTTEGSLSFHSPNGEILERPNLKVFSFVDLKSATRNFRPDTLLGEGGFGRVYKGWLDEKNLTPAKPGSGIMVAIKKLNSESTQGFQEWQAKVNFLGRLSHPNLVKLLGYCWDDEELLLVYEFMAKGSLENHLFRRNPNIEPLSWNTRIKIAIGAARGLAFLHDSEKQVIYRDFKASNILLDGSFNAKISDFGLAKLGPSGEQSHVTTRVMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEMLSGMRALDRTRPPGQQNLVEWGKPLLSNKKKLKNIMDGKIEGQYSQKAAIQAAQLSLKCLENDPKQRPSMKDVLESLEIIEAIQVKSKNHISRHQPPIHHDTMALNVDDVLYCYYNPDKEDFGGLVRNCYKKLLYFSDSLHVVQLGTIGKNRFHHANILVAI 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01679 457 MobiDBLite consensus disorder prediction 41 63 - -
Car07g01679 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Car07g01679 457 SUPERFAMILY Protein kinase-like (PK-like) 62 374 IPR011009 -
Car07g01679 457 Gene3D Transferase(Phosphotransferase) domain 1 176 396 - -
Car07g01679 457 PANTHER SERINE/THREONINE-KINASE CX32, RELATED PROTEIN 42 385 - -
Car07g01679 457 ProSiteProfiles Protein kinase domain profile. 90 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01679 457 PANTHER OS01G0588500 PROTEIN-RELATED 42 385 - -
Car07g01679 457 CDD STKc_IRAK 96 375 - -
Car07g01679 457 Gene3D Phosphorylase Kinase; domain 1 74 175 - -
Car07g01679 457 Pfam Protein tyrosine and serine/threonine kinase 94 372 IPR001245 GO:0004672|GO:0006468
Car07g01679 457 MobiDBLite consensus disorder prediction 41 65 - -
Car07g01679 457 ProSitePatterns Protein kinases ATP-binding region signature. 96 129 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01679 Car-Chr7 17095027 17099949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01679 76 372 Glycoside Hydrolase AT3G07070 51.678 4.51e-106 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Car07g01679 PK_Tyr_Ser-Thr 8.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01679 - - gmx:100794193 597.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00744 08 6561226 6563701 Car07g01679 07 17095027 17099949 PCT