Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01652 ATGTGCCATCCACATATCTTTTCTTTATTTTTAATATTGCTAGTTCTTGCTTTTGAAGCTTGTGAATCCCAAGATTGTAGTAATCCACCACTAGACATCACCGTTAGTCAATCACAGCAAGCAAAGTTTAAAACAATTCAAAGTGCCATTGATTCTGTCTCTGAACAAAATTCTCGATGGATTCACATTCATATTTCCCCTGGTGTTTACAAAGAGCAAATTCAAATTCCCATGAACAAACCATGCATTTATCTTGAAGGAAGTGGTAGCGACTCTACAAGTATCGAATGGGATTCACATCTCAATGCTACTTTTGATGTACAAGCAAATTACACCGTTGCCAAAAGTATTGCATTCTTGAACACACTCAACACACCTATAATACTAGAGAAGGAGACCCCAATCACACAAGCTGTGGCAGCTTTGATAAGTGGAGATAAATGTGCATTCTATGATTGTGCTTTTTATGGGGTGCAAGACACTCTTTATGATCATCGTGGCCGCCATTACTACCACAACTGTTATATTCAAGGTGGAACTGATTTCGCAAGTATATTGAACTTTTCAATGGGGAAAAATGGTCCGAAACATGATGGATGTTTTACGGCACAAAGAAGAACGACAGCAAATGATACAAGTGGATTTGTGTTTAAAAATTGTACATTCACCGGTACAAGAGGAAATGCTATACTTGGGAGATCTTTGGATGCTTATGCAAGAGTTATCATTGCCAATTCATACCTATCAAATGTTGTTACTCCTGTCGGTTGGAATTCTAGGACCTTTGTTGGTCATGAAGAAACCATCACGTTTGTTGAGGTGGGAAACAGAGGACCAGGAGCGAATCAATCCAAGCGAGTGAAATGGATGAAGCACTTGAGTGGAGCTGAGCTTGACCAATTCTTGAATATCTCATTTATTGATAACGAAGGGTGGCTTCCCAAATTGCCAACGAACATCGCCATTTGA 969 0.3922 MCHPHIFSLFLILLVLAFEACESQDCSNPPLDITVSQSQQAKFKTIQSAIDSVSEQNSRWIHIHISPGVYKEQIQIPMNKPCIYLEGSGSDSTSIEWDSHLNATFDVQANYTVAKSIAFLNTLNTPIILEKETPITQAVAALISGDKCAFYDCAFYGVQDTLYDHRGRHYYHNCYIQGGTDFASILNFSMGKNGPKHDGCFTAQRRTTANDTSGFVFKNCTFTGTRGNAILGRSLDAYARVIIANSYLSNVVTPVGWNSRTFVGHEETITFVEVGNRGPGANQSKRVKWMKHLSGAELDQFLNISFIDNEGWLPKLPTNIAI 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01652 322 SUPERFAMILY Pectin lyase-like 29 319 IPR011050 -
Car07g01652 322 Gene3D - 28 321 IPR012334 -
Car07g01652 322 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 7 319 - -
Car07g01652 322 PANTHER PECTINESTERASE 7 319 - -
Car07g01652 322 Pfam Pectinesterase 32 308 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01652 Car-Chr7 16624327 16626142 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01652 29 313 Carbohydrate Esterase AT1G05310 36.218 1.18e-57 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01652 - - aprc:113866591 419.468