Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01646 ATGGGCGTATCCAAGAAATGGTTGAGAATTGTTCGTAAAAAATTCTTAAGATATTCTTCCAATAAAGACATAATAACACTCCCTCCTCGTACAAGTGTTTGCACAAATCAAAGCGAACAAGCCATACTTGAAAACCAAGTAACCACCGTTAGCGAAGACTTGAGGATAAGTTTGCCATTACAAGCTATTAATTATTCATCAAACATATTCACCAAGGAACACTTTGCGGCAATTAAGATTCAAGCTTATTTCAGGGCTCATCTCGCAAGAAGAGCACATAGGGCATTGAAAAGCCTTGTGAAGCTACAAGCGTTAGTTCGTGGGGTGTGTGTGAGGAGACAATCGCGTATAGCAATGCAATGTATGAACGCACTTGTTCGCTTACAAGTCAGGGTTCGTGCAAGGCAATTACTTGGTACTACTAGTTTTGATCATAGTTATAATTAG 447 0.3937 MGVSKKWLRIVRKKFLRYSSNKDIITLPPRTSVCTNQSEQAILENQVTTVSEDLRISLPLQAINYSSNIFTKEHFAAIKIQAYFRAHLARRAHRALKSLVKLQALVRGVCVRRQSRIAMQCMNALVRLQVRVRARQLLGTTSFDHSYN 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01646 148 PANTHER OS04G0561100 PROTEIN 4 140 - -
Car07g01646 148 Gene3D - 71 124 - -
Car07g01646 148 ProSiteProfiles IQ motif profile. 73 101 IPR000048 GO:0005515
Car07g01646 148 ProSiteProfiles IQ motif profile. 97 124 IPR000048 GO:0005515
Car07g01646 148 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 116 IPR027417 -
Car07g01646 148 PANTHER IQ-DOMAIN 5-RELATED 4 140 - -
Car07g01646 148 Pfam IQ calmodulin-binding motif 76 94 IPR000048 GO:0005515
Car07g01646 148 SMART iq_5 72 94 IPR000048 GO:0005515
Car07g01646 148 SMART iq_5 95 116 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01646 Car-Chr7 16588093 16588794 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01646 63 138 IQD Protein Family AT3G51380 71.053 2.54e-30 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01646 - - cam:101507643 269.626