Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01645 ATGAATTTTAATTCTTCTGAATATGTTTCCCCTTTTCTAGATTCAGTTTTACCAACCGAATCATCACCCGATTGGAACAACAAAGCCGACAATGCATGGCAACTAACAGCAGCAACATTAGTGGGCCTTCAAACTGTTCCTGGGCTTGTAATACTGTACGGCAGCATGGTTAAGAAAAAATGGGCCGTGAATTCAGCTTTCATGGCCCTATATGCATTTGCTGCCGTGTTAGTTTGTTGGGTTTTATGGGCCCATGAAATGGCATTTGGGACAAAACTTCTACCCTTTGTTGGAAAGCCCAATTTTGCATTGACACAAAAAATTCTACTTGCAAAAGCATCAACAAATTATTATCTACCAATGGCTGACTTTGTTTACTATCAATTTGCTTTTGCTGCAATTACTGTTGTGTTGCTTGCAGGGTCTTTACTTGGGAGAATGAATTTTTATGCATGGATGTTGTTTGTTCCTATGTGGCTTACATTTTCTTACACTATTGGGGCTTTTACTATATGGGGGAATGGCTTTCTTCAAACTATAATAATTGATTATGCTGGTGGCTTTGTAATTCATCTATCATCTGGCGTTGCTGGTTTCACAGCTGCTTATTGGGTGGGTCCAAGAAGTTCAGAAGATAGGCAAAATTTTCCACCAAATAACATAGCACACATGCTTGGAGGTGCAGGGTTCTTATGGATGGGTTGGACAGGTTTTAATGGTGGAGCACCATTCCAAGTTGGAGAGATCACTTCATTGGCAATCTTCAATACACATCTATGCACTGCCACAAGCCTACTTGTTTGGCTTGCACTAGATATGGTTGTATACCATAAGGGCTCACTCATTGGTTCTGTTCAAGGAATGATCACTGGCCTCGTTTGCATCACTCCAGGTGCAGGGTTGGTGGATCCATGGGCAGCAATATTGATGGGAGCTTTGTCTGGTTCAATTCCATGGTACACAATGATGGTGTTACATAAAAAATCTCCATTCTTTCAAAGTGTGGATGATACATTAGGAGTCTTTCACACTCATGCCGTAGCTGGTATTCTTGGAGGAATCCTTTCCGGTGTGTTTGCCAAGCCCAAACTTTTAAGGATACTCTATGGGCCTGAAATGCCTTATGGGCCTGGCTTATTCTATAGCTATTTTGATGGAAATATGGGCCATGGAATTAGGCAAATATTGTACCAATTACTAGGAGCAACTTTTATTACTCTTTGGAATGTTGTTGTCACAAGCCTCATTTGTATTCTTGTAAGTCACATTATGGATCTTAGGATGCAAGAACAAGACCTTGAGGTTGGTGATGATGCTATTCATGGTGAAGAAGCTTATGTTTTATGGGGTGATGGAGAAAAAATGCGACTCTCTCTTCATGTACAAATAACTTCAACAATTCCTTCCATCTCTCGCCAAAGACATTCAATTCCTCCTATCGATAAAAATGTGGAATAA 1458 0.404 MNFNSSEYVSPFLDSVLPTESSPDWNNKADNAWQLTAATLVGLQTVPGLVILYGSMVKKKWAVNSAFMALYAFAAVLVCWVLWAHEMAFGTKLLPFVGKPNFALTQKILLAKASTNYYLPMADFVYYQFAFAAITVVLLAGSLLGRMNFYAWMLFVPMWLTFSYTIGAFTIWGNGFLQTIIIDYAGGFVIHLSSGVAGFTAAYWVGPRSSEDRQNFPPNNIAHMLGGAGFLWMGWTGFNGGAPFQVGEITSLAIFNTHLCTATSLLVWLALDMVVYHKGSLIGSVQGMITGLVCITPGAGLVDPWAAILMGALSGSIPWYTMMVLHKKSPFFQSVDDTLGVFHTHAVAGILGGILSGVFAKPKLLRILYGPEMPYGPGLFYSYFDGNMGHGIRQILYQLLGATFITLWNVVVTSLICILVSHIMDLRMQEQDLEVGDDAIHGEEAYVLWGDGEKMRLSLHVQITSTIPSISRQRHSIPPIDKNVE 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01645 485 Pfam Ammonium Transporter Family 32 446 IPR024041 GO:0008519|GO:0016020|GO:0072488
Car07g01645 485 PRINTS Rhesus blood group protein signature 128 144 IPR002229 GO:0005887
Car07g01645 485 PRINTS Rhesus blood group protein signature 222 240 IPR002229 GO:0005887
Car07g01645 485 PRINTS Rhesus blood group protein signature 253 275 IPR002229 GO:0005887
Car07g01645 485 PRINTS Rhesus blood group protein signature 346 362 IPR002229 GO:0005887
Car07g01645 485 PANTHER AMMONIUM TRANSPORTER 12 475 - -
Car07g01645 485 SUPERFAMILY Ammonium transporter 25 428 - -
Car07g01645 485 ProSitePatterns Ammonium transporters signature. 183 208 IPR018047 GO:0008519|GO:0016020|GO:0072488
Car07g01645 485 Gene3D Ammonium transporter AmtB like domains 14 449 IPR029020 -
Car07g01645 485 PANTHER AMMONIUM TRANSPORTER MEP2 12 475 IPR001905 GO:0008519|GO:0016020|GO:0072488
Car07g01645 485 TIGRFAM amt: ammonium transporter 30 446 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01645 Car-Chr7 16578386 16580782 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01645 121 462 Inorganic Solute Cotransporters AT2G38290 58.892 9.71e-140 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01645 K03320 - gmx:100815876 789.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01822 06 18096743 18101212 Car07g01645 07 16578386 16580782 PCT