Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01642 ATGGTTAATGATAGGAATCCATCTACACATAATATGTTACTAGGATTTATTGCAGGCATTTCAACAGTATTGGCATTGGCTTTATTAATGTTCTGCCTCTTCTGGAAAAGGGTCATTCCATTTTTTAACAAACCTAAGAATTTGAAAGGAAAGGAGTTTGAAAGCTTGAAATATGAAAAAATATCTATAAGATGTTTTAATCTTGAGGAACTAGAGAGAGCTACCAAAAATTTTAGCCAAGATTGCTTATTGGGTTCTGGTGCATTTGGTAATGTTTATAAGGGAACCTTTGAGTTAGAAGGAATATTAGCCATAAAGAGATCTCATTCTGAATCATTCTTAAGTGTTGAGGAATTCAGAAATGAGGTTCGGCTTCTTTCAGCAGTAAAGCACAAGAATCTTATTGGTCTAGTTGGATATTGTGAAGAACCAGAACGAGAAGGAGCAAAAATACTAGTCTATGAATATGTTCCAAATGGTTCACTTCTGGAGTACATGATAGGAAACACAAGGAGAAGCTTAACTTGGAAACAGAGAATCAACATAGCAATAGGAGCAGCTAAAGGCATAGCTTATTTGCATGAAGAGATGAAGCCAAGTATAATTCACCGTGACATAAAACCAAGTAACATTCTATTAGGGGAAAATTTTGAGGCTAAAGTTTCAGATTTTGGGTTGGTAAAATCAGGGCCAACTGGTGATCAATCACATGTTAGTAGCCAAATCAAAGGGACACCAGGGTACCTTGACCCTGCATATTGTTCAAGCTGCCATTTGACCAAATTCAGTGATGTGTATAGTTTTGGTGTCATACTTTTGCAACTTATTTCAGCTAGGCCTGCCGTGGATAATGCTGAAAATCAAAGTAACCAACATATTATTGATTGGGCAAGGCCTAGCATAGAGAAGGGTAATATTGACGAAATCATGGATGCAAATCTATTTTGTCAAAGTGAGCCATGCAATATGAAAGTCATGTTGAAGATGGGGCAACTTGCAATAAAATGTATAGCTCAAGAACCAAAACATCGTCCCACAATGACACAAGTTTGTAAAGAACTAGAGCAAGCCCATTATTCAGATGATAGCTTCAGTAACAAGGAACCAGAGACACGTGGATCAGTGGAACGCTATGATTGTTCACAGAGCTTTGTGAGCTTAGATGGTGTAGGATTAGAGAAATTTCATGTTGATATGGATAGCTTCTCCTTTAAGAGCACAAACTTAAGGTGTCTAGAAAATAATAGCTTTAGTATTGATATTGACAAGAACAATGTGAGTAGAATATAA 1290 0.3659 MVNDRNPSTHNMLLGFIAGISTVLALALLMFCLFWKRVIPFFNKPKNLKGKEFESLKYEKISIRCFNLEELERATKNFSQDCLLGSGAFGNVYKGTFELEGILAIKRSHSESFLSVEEFRNEVRLLSAVKHKNLIGLVGYCEEPEREGAKILVYEYVPNGSLLEYMIGNTRRSLTWKQRINIAIGAAKGIAYLHEEMKPSIIHRDIKPSNILLGENFEAKVSDFGLVKSGPTGDQSHVSSQIKGTPGYLDPAYCSSCHLTKFSDVYSFGVILLQLISARPAVDNAENQSNQHIIDWARPSIEKGNIDEIMDANLFCQSEPCNMKVMLKMGQLAIKCIAQEPKHRPTMTQVCKELEQAHYSDDSFSNKEPETRGSVERYDCSQSFVSLDGVGLEKFHVDMDSFSFKSTNLRCLENNSFSIDIDKNNVSRI 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01642 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Car07g01642 429 PANTHER OS01G0750732 PROTEIN 16 406 - -
Car07g01642 429 Pfam Protein kinase domain 81 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01642 429 ProSitePatterns Protein kinases ATP-binding region signature. 84 106 IPR017441 GO:0005524
Car07g01642 429 Gene3D Phosphorylase Kinase; domain 1 42 156 - -
Car07g01642 429 SUPERFAMILY Protein kinase-like (PK-like) 56 356 IPR011009 -
Car07g01642 429 Gene3D Transferase(Phosphotransferase) domain 1 157 379 - -
Car07g01642 429 ProSiteProfiles Protein kinase domain profile. 78 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01642 429 CDD STKc_IRAK 84 356 - -
Car07g01642 429 SMART serkin_6 78 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01642 Car-Chr7 16531819 16535259 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01642 64 355 Receptor kinase-like Gene Family AT1G30570 42.808 3.44e-75 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Car07g01642 Pkinase 1.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01642 - - gmx:106794267 656.751