Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01638 ATGCTCAATTTCAGCAGAATTATCATCATCTTAATAATCTTGGTGTTACATTGCGATGCACACATATTCACATTCACGATGCACCACCGTTACTCTGAACCAGTCAAGAAATGGTCTCTATCCGCTCCCTCTCCATCCCATCGTTGGCCCGAAAAAGGAACTGTCGAATACTACGCCGAGTTAGCCGACCGCGACCGCTTCCTCCGCGGTCGCAGACTCTCCCAATTCGACGCCGGTCTCGCTTTTTCCGACGGCAATTCCACCTTCCGCATCAGCTCCCTCGGATTTTTGCATTATACAACAGTTGAACTAGGTACACCTGGAGTGAAGTTCATGGTGGCACTTGATACAGGAAGTGACCTGTTTTGGGTACCCTGTGATTGCACAAGATGTGCAGCTACTGATAGTACTGCCTTTGCTTCTGCTTTGGCTTCAGATTTTGACCTAAGTGTGTATAATCCTAATGGATCTTCAACAAGTAAAAAAGTCACTTGTAACAATAGTCTCTGCACGCACCGTAACCAATGCCTTGGGACATTCAGCAACTGCCCTTACATGGTCTCTTATGTTTCCGCCGAAACCTCTACGTCTGGAATACTTGTAGAGGATGTTCTGCACTTAACTAAAGAAGATGATCACCAGGACCTTGTTGAGGCAAATGTCATATTTGGCTGTGGACAAGTTCAGAGTGGATCGTTCTTAGATGTTGCTGCTCCCAACGGTTTGTTTGGACTTGGTATGGAGAAAATATCAGTTCCTAGCATGTTATCACGGGAAGGATTTACTGCAGATTCGTTCTCCATGTGTTTCGGACGAGATGGCGTTGGAAGAATAAGTTTTGGGGACAAAGGAAGTATTGATCAAGATGAGACTCCATTTAATCTGAACCCATCACACCCTACCTATAACATCACGGTCAATCAAGTCCGTGTAGGAACAACTCTAATCGATGTGGAATTCACTGCTCTTTTTGATTCTGGAACTTCTTTTACATATTTGGTTGATCCAACCTATTCAAGGCTTTCTGAGAGTTTTCATTCCCAAGTGGAAGATAGGCGACGCCCATTCGATTCAAGGATCCCTTTTGAATATTGTTATGATATGAGTCCTGATGCAAATACTAGCGTGATCCCTAGTATGAGTTTAACTATGGGAGGTGGAAGCCGTTTCCCTGTTTATGATCCAATAATTATTATCTCTACACAGAGTGATCTTGTATACTGTCTAGCAGTAGTCAAGAGTGCTGAGCTGAACATAATAGGGCAAAACTTCATGACCGGTTACCGTGTTGTTTTTGACCGGGAAAAGCTCACATTGGGATGGAAGAAATCTGATTGTTATGACATTGAGGATCATAATAATGCTGTCTCAACAAGACGACACTCAGATACCGTGCCTCCTGCAGTGGCCGTGGGACTTGGCCATTACCCTGCCCCTGATTCAAGTAAAAGGTCCAAATACAATTCTCAGCAGTCAAGTGCATCACCCTCACCGCTTTATAGCCACACTTCACTTCTGAGTTTCTTTGGATCCCTAGTATCTTGTATTTGGGTTTGTTTACATGTTCTATGA 1572 0.4396 MLNFSRIIIILIILVLHCDAHIFTFTMHHRYSEPVKKWSLSAPSPSHRWPEKGTVEYYAELADRDRFLRGRRLSQFDAGLAFSDGNSTFRISSLGFLHYTTVELGTPGVKFMVALDTGSDLFWVPCDCTRCAATDSTAFASALASDFDLSVYNPNGSSTSKKVTCNNSLCTHRNQCLGTFSNCPYMVSYVSAETSTSGILVEDVLHLTKEDDHQDLVEANVIFGCGQVQSGSFLDVAAPNGLFGLGMEKISVPSMLSREGFTADSFSMCFGRDGVGRISFGDKGSIDQDETPFNLNPSHPTYNITVNQVRVGTTLIDVEFTALFDSGTSFTYLVDPTYSRLSESFHSQVEDRRRPFDSRIPFEYCYDMSPDANTSVIPSMSLTMGGGSRFPVYDPIIIISTQSDLVYCLAVVKSAELNIIGQNFMTGYRVVFDREKLTLGWKKSDCYDIEDHNNAVSTRRHSDTVPPAVAVGLGHYPAPDSSKRSKYNSQQSSASPSPLYSHTSLLSFFGSLVSCIWVCLHVL 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01638 523 Pfam Xylanase inhibitor C-terminal 302 442 IPR032799 -
Car07g01638 523 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 322 333 IPR001969 GO:0004190|GO:0006508
Car07g01638 523 Gene3D Acid Proteases 90 281 IPR021109 -
Car07g01638 523 PANTHER ASPARTYL PROTEASES 7 469 IPR001461 GO:0004190|GO:0006508
Car07g01638 523 Gene3D Acid Proteases 286 447 IPR021109 -
Car07g01638 523 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 113 124 IPR001969 GO:0004190|GO:0006508
Car07g01638 523 Pfam Xylanase inhibitor N-terminal 99 282 IPR032861 -
Car07g01638 523 SUPERFAMILY Acid proteases 93 449 IPR021109 -
Car07g01638 523 ProSiteProfiles Peptidase family A1 domain profile. 98 442 IPR033121 -
Car07g01638 523 PRINTS Pepsin (A1) aspartic protease family signature 104 124 IPR001461 GO:0004190|GO:0006508
Car07g01638 523 PRINTS Pepsin (A1) aspartic protease family signature 322 333 IPR001461 GO:0004190|GO:0006508
Car07g01638 523 PRINTS Pepsin (A1) aspartic protease family signature 418 433 IPR001461 GO:0004190|GO:0006508
Car07g01638 523 PANTHER ASPARTYL PROTEASE FAMILY PROTEIN 1-LIKE 7 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01638 Car-Chr7 16506612 16509787 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01638 102 446 Miscellaneous Gene Families AT1G44130 25.926 1.35e-21 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01638 - - gmx:100783577 881.708
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00702 08 6112406 6120601 Car07g01638 07 16506612 16509787 PCT