Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01626 ATGACAACAGAAGCAACAACTTCTTTGATGCAAAAGACAAAGAGGAAGAAGCGAACCCTAGAACATAAGGACCCTGAACTCGACCGCCTCGAATCACTTCCATGGAACTCTTCTCTTCCTCAACACAATGACGACGACAACTCTTTTTCACTTTTCACTGGCTCTAATGAACTCGAAGGAGGTTTTCTTTCACTGGAGGAGATTGATGAGACTGAATATGGTTTAGATATTCCTGATCCTGAACATCATGACAGGAAGCATAATTCGAAGCAGGACAAGAAGGTGAATAAGCAGAAGCAAGATGGTGATGGAGAAACTGTTAAGGAGGAGAGCATCAAGTCTGAAGTGaagaaaaagaaaaagaaaaagaagaaaaataagGATCCAAAAGAAAACCAGGAAGTTCAACATTCAAATACCGGTGTGGATGCTGATGTGAAGGATGATGTTGGGGAAGAGAACATCGATGAAACTGATTATTATGCATGGAACGAGTTGAGGCTTCATCCTCTTTTAATGAAAGCAATTTACAAGTTAGGATTCAAGGAACCAACACCGATACAGAAAGCTTGTATTCCGGCTGCTGCTCATCAAGGGAAGGATGTTATTGGGGCTGCAGAGACGGGATCTGGTAAAACACTTGCATTTGGTTTGCCCATTTTGCAACGTCTTTTAGAGGAGCGTGAGAAGGCCGTCAATATGGTTGAGGAAAAGGGCGAAGAAGCTGCTCCTACAGGTCTTTTAAGGAGTCTTATTATTGCTCCAACTAGAGAACTTGCACTTCAGGTCACTGATCATCTGAAAGCAATAGCCAAGTATATTAATGTTAGGGTGACCCCTATAGTTGGAGGTATTTTAGCAGAAAAGCAGGAGAGACTTTTAAAAGCAAGGCCTGAGATTGTGGTCGGTACTCCCGGGAGGCTATGGGAACTTATGTCATCTGGAGAAAAGCATCTTGTTGAGTTACATTCATTGTCTTTCTTTGTGCTTGATGAGGCTGATCGAATGGTACAAAATGGCCATTTTAAGGAGTTGCAATCAATAATTGACATGCTTCCCATGTCCAATGTCTCCAGTAAAGATGATTCTCAAGATGCACATAATTGTGTTACAGTTTCTAGCTTACAAAGAAAGAAAAGGCAAACTCTTGTTTTTTCTGCAACTGTTGCACTACCTAATGCTGCAGTTATTGATCTTACCAATCCATCCATATTAGCAGCTAAGATTGAGGAGTCATTTATTGAATGCACAGAAGATGATAAAGATGCCCATTTGTATTATATTCTCACTGTCCATGGACAAGGCCGTACAATAGTTTTCTGCACGTCAATTGCAGCTTTGCGCCATATTTCTTCCATATTGCGCATTCTTGGCGTCAATGTTTGGACTCTTCATGCTCAAATGCAACAGCGAGCACGTTTAAAGGCAATGGATCGCTTTCGTGAACATGAAAATGGCATACTTGTTGCTACAGATGTTGCTGCAAGGGGTCTTGATATTCCTGGTGTTAAAACTGTTGTCCACTATCAGCTTCCACATTCAGCAGAGGTTTATGTTCATAGAAGTGGAAGAACAGCTAGAGCTTCTGCCGAAGGTTGTAGCATTGCTTTAATCTCCCCAAAAGATACATCAAAGTTTGCTTCGTTGTGCAAGTCATTTTCAAAGGATACCTTTCAGCGGTTTCCTTTGGAGAACTCATACATGCCAGAGGTTCTAAAACGATTGTCTCTTGCACGTCAAATAGACAAGATAACAAGGAAGGATTCCCAGGAGAAGGCTGAAAAAAGCTGGTTTGATCGGAATGCTAGCTCAGTTGATTTAGTTACAGAAAATAATGACAGTGAGGATGAACAAGTTAATAAATATAAGCAAAAGAAAGCCAGCTCTAAACAATTGAGGAAATTGCAGACGGAGCTCAGTGTACTGATTTCACGTCCTCTGCAATCAAAAACGTTTTCACATCGATATCTAGCAGGGGCTGGTGTAACGCCCCTCTTACAGCAACAATTGCAACAGTTAGCAAAGCAAAAACTAAGTGACCATCAGGGAGCAGGATTAGGCAAAAAGGGAAAATTGGTTGTGATTGGTCAAGATTGTGTGGATGCACTTCACGCACTTCGAAGTGCTGGCGAAGAGGTGCGCATGGATATCAAGGATTCATTTCGAAAACAAAGAAATTCAGTGGATATAAAGAGAAAAAGAAAGCAAGAGAAGACACGTTTGCGTGATCAGCGTAAAAAGCAGAAGAGAAAGCTAAACCAGGACGATGAATAG 2274 0.4099 MTTEATTSLMQKTKRKKRTLEHKDPELDRLESLPWNSSLPQHNDDDNSFSLFTGSNELEGGFLSLEEIDETEYGLDIPDPEHHDRKHNSKQDKKVNKQKQDGDGETVKEESIKSEVKKKKKKKKKNKDPKENQEVQHSNTGVDADVKDDVGEENIDETDYYAWNELRLHPLLMKAIYKLGFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEEREKAVNMVEEKGEEAAPTGLLRSLIIAPTRELALQVTDHLKAIAKYINVRVTPIVGGILAEKQERLLKARPEIVVGTPGRLWELMSSGEKHLVELHSLSFFVLDEADRMVQNGHFKELQSIIDMLPMSNVSSKDDSQDAHNCVTVSSLQRKKRQTLVFSATVALPNAAVIDLTNPSILAAKIEESFIECTEDDKDAHLYYILTVHGQGRTIVFCTSIAALRHISSILRILGVNVWTLHAQMQQRARLKAMDRFREHENGILVATDVAARGLDIPGVKTVVHYQLPHSAEVYVHRSGRTARASAEGCSIALISPKDTSKFASLCKSFSKDTFQRFPLENSYMPEVLKRLSLARQIDKITRKDSQEKAEKSWFDRNASSVDLVTENNDSEDEQVNKYKQKKASSKQLRKLQTELSVLISRPLQSKTFSHRYLAGAGVTPLLQQQLQQLAKQKLSDHQGAGLGKKGKLVVIGQDCVDALHALRSAGEEVRMDIKDSFRKQRNSVDIKRKRKQEKTRLRDQRKKQKRKLNQDDE 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01626 757 PANTHER ATP-DEPENDENT RNA HELICASE DDX24 84 678 - -
Car07g01626 757 MobiDBLite consensus disorder prediction 94 116 - -
Car07g01626 757 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 249 545 IPR027417 -
Car07g01626 757 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 161 189 IPR014014 GO:0003724
Car07g01626 757 SMART ultradead3 180 424 IPR014001 -
Car07g01626 757 MobiDBLite consensus disorder prediction 1 148 - -
Car07g01626 757 Gene3D - 406 644 IPR027417 -
Car07g01626 757 Coils Coil 605 625 - -
Car07g01626 757 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 408 569 IPR001650 -
Car07g01626 757 MobiDBLite consensus disorder prediction 34 57 - -
Car07g01626 757 MobiDBLite consensus disorder prediction 720 736 - -
Car07g01626 757 Gene3D - 109 404 IPR027417 -
Car07g01626 757 Pfam Helicase conserved C-terminal domain 420 528 IPR001650 -
Car07g01626 757 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 329 337 IPR000629 -
Car07g01626 757 CDD SF2_C_DEAD 409 538 - -
Car07g01626 757 Pfam DEAD/DEAH box helicase 185 390 IPR011545 GO:0003676|GO:0005524
Car07g01626 757 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 193 407 IPR014001 -
Car07g01626 757 PANTHER RNA HELICASE 84 678 - -
Car07g01626 757 SMART helicmild6 448 529 IPR001650 -
Car07g01626 757 Coils Coil 221 241 - -
Car07g01626 757 Coils Coil 731 757 - -
Car07g01626 757 MobiDBLite consensus disorder prediction 720 757 - -
Car07g01626 757 CDD DEADc_DDX24 172 391 - -
Car07g01626 757 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 353 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01626 Car-Chr7 16368885 16377805 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01626 136 554 Eukaryotic Initiation Factors Gene Family AT1G72730 27.828 6.04e-43 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01626 K14805 - gmx:100806018 1137.48