Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01621 ATGGCTACCAAGTGCATGCATGTTTTTGATAGATTTTTGTGTTTTGTCACTTCTTGGAAGAAAAGTAACACACCAACTAGTAGAAGAAATTTCCAAAGAGATGTGGAGAAAGAAGAATTCCAATATACTAGTACTCAATGTCTCTCATCTTATTACAGTGTCTTTGTGGTTCGCTTAGCAATCATGGTTATGCTAGCTATCTTGATTGGTCTACTCACTTTCCTAACATGGCATTTCACAAAGATTTATACAACAAAGTCTCTAAATAGTTTGGCTTATGACCTGCGTTACGAACTTCTACAACGTCCGATTTTGAGGATGTGGAACATTTTGAACTCTACTGCTGAAATCACAAGTGCTCAAGTTAAGCTTTCTGAGTATGTTATCAGAAGCCACAGTAATCTAGCCAATCAAGCTGAACACGTTGAGATGTATGAAGCCATGAGGGCTGTAACATGGGCACTTTTTGCTAGCCGAAAAGCTCTCGACTCAATAACTGTCAAATATAGCAACGGTTTTGTCCAGGCATTTCATAGAGACTTGAAGGATAATAACACATTTTACATTTACACTGATCTTGCATATAATGAAACCAATTCATTAACAGCACATAAAGTTTTGAATGATAAAGACATTCATGGAAACAAGTCTACGATTTGGTACCGAGAACAGCTTGATCCTGTCAGTGGCGAGAAGATAGGAAACGCAATGCAAATTGCACCAGAAGACTCAATAAGTATAGCTGGCCTATCCCAAGTACCTGACGGCGTAGCTTCGTGGCATGTTGCTGTGAGCAAGTTTACAGATTCGCCGTTACTTTCTGCAGCATTGCCAGTATGGGATTCTTCTAATAAGACCATTGTTGCAGTTGTTGGAGTTACAACTGCACTTTATAGTGTAGGACAGTTAATGATGGAACTAGTTGATAAACACAGTGGTCATATGTATTTGACCTCTCAAAAAGGCTATTTGCTTGCAACTTCCACAAATGACCCACTACTGACAAATTCAACAAAGCCACCGAAGCTTAAGATGGCCGTTGATTGCGATAACAAAGTGATAAGAGAAGGAGCTCGGTGGCTAGAGAAAACCTATGGGAACAATTCTCCTCCAAGTCATGAGGTTCGTGTAGAGAATGCCAGACTAGGCCACCAACAATATTACATTGACTCGTTCTTCCTAAACTTGAAGAGACTTCCTCTGGTGGGTGTAATAATCATACCAAGAAAGCATATCATGGGTCAGGCTGATCAAAGAGCCTTCAAAACATTGGTTATTCTGATATCTGCTTCATTGTGTATTATTGCCATTGGATGTGTTTGCATTTTGATATTGACAAATGGAGTATCAAAGGAAATGAAGCTAAGAGCAGAACTAATCAGTCACCTCGAAGCAAGAAGGAAGGCAGAGGCATCAAGCAACTATAAAAGCCAATTTCTTGCAAATATGAGCCATGAACTGAGGACACCGATGGCAGCAGTAATCGGGTTACTTGACATTCTTATGTCTGACGATCACCTCACAAACGAACAATGTGCAACCATTACTCAAATAAGAAAATGCTCAACTGCATTGCTCCGTTTACTCAACAACATATTGGATCTAAGCAAGGTGGAATCTGGAAAACTTGTCCTAGAAGATGCAGAATTTGACTTGGGAAGGGAACTTGAAGGGCTTGTAGATATGTTTTCTGTACAATGCATTAACCACAGTGTAGAAACTATTTTAGACCTTTCTGACGATATGCCAAAGCTAGTTCGCGGAGATTCTGCTAGAGTAGTTCAAATTTTTGCGAATTTGATCAACAACTCAATCAAGTTTACTCTATCTGGTCACATTATTCTGAGAGGATGGTGTGAAAACTCAAATTCTTATGATGATATTGAAAGTTTTACTCGGGAGCAGAAGAAATTGGGATGTTCGCAGAAGATCAGAACGAAACAACATGAAAACCATGCAAAGAAGAGTTCTAATAGTGATAACAAAATGATCCTTTGGTTTGAAGTTGATGACACAGGCTGTGGTATTGATCCAAGTAAATGGGATTCTGTGTTTGAAAGCTTTGAGCAAGCTGATCCGTCAACTACTAGACTGCATGGAGGCACTGGTCTTGGTCTTTGCATTGTCAGATCCCTGGTTAATAAGATGGGTGGAGAAATCAAGATTGTCAAAAAGGACGGTCCAGGAACACTAATGCGATTATACCTGTGTCTCAATGCACCCGTGGATGCCACAGAACAACATTGTCAAGTAGATTTTGCTAACAATGGCTTAGTGGTACTTCTTGCACTACATGGCAACATGAGTCGCATAATTACATCTAAGTGGTTACAGAAAAACGCAGTGGTCACTATCGAGGCATCTGAATGGAATGGATTAACACAAATTCTTAGAGAACTATTTAATGCAAGAACTTCAACTCATAACAATGACTTTGATTCACATTATGCATCTCATGAGGTCATGAAGTCTAAATTTCTGAGCATACAAGAGTTGACAAATCCAACATTTCTCATTGCTGTTGATATTGATCTACTTGACTTGAGCACTGATATATGGAAGGAACAACTTAACTTCCTTCACAAGTACTCCGCGAGAGCGAGATTCGTATGGTTACAAAATTACGACTCCGGTAATACCATAAAGACGGAGCTTCGCAAGAAAGGATATATACTAACAGTCAATAAACCTCTTTACAAAACAAAGATGATTCATATTTTGGAAGATGTCATAAAGGAAAGAAATTTTGGGCTACAAAAGAAAAATATGATTATTCCGAGAACTACAACGAAAGAGGGTGATTTGCATGAGAGTTTTGAGATTGATTATTCTCATTGTGATGCTGCAAGCTCAGATGGTTCTGACATATATGAAGATAAACAAAAAGAAGAAGTAGTTAGATTCCATCCATCATCACAATACCAGATAAATAACTGCTTCTTAGGATTAACTCATGAAAATAAGGAACATAATGATCCTAGGAAAGAAGTAACATTTTCGATAGGAGAAAAAGGCGAGGATTCTGGATGTGGTGAAACATCATGTAGGGTCAGTGGCTCAAGTAAAGCTGTGAATGGAAAGAAATCTCTTGAAGGTCTAAGGATATTGCTTGCAGAAGATACACCAGTAATTCAAAGGGTTGCTACCATAATGCTTGAAAAAATGGGAGCCATTGTCGTTGCTGTAGGTGATGGACAACAAGCAGTGGATGCTCTGAATAGTATGTTTGGTGTTGAAGATTGTAGAAAAGAGTCTCTCCTTAAAGAAAGAAACACAAGAACATCTCAAACTGAGATTCTATGTTTGCCTTCATATGATTTGATCCTAATGGATTGTCAGATGCCAAAGATGGATGGGTATGAGGCAACAAAAGAAATAAGAAAATCAGAAGAGGGAACTGGTTTCCACATTCCAATTGTTGCACTTACAGCTCATGCAATGTCATGTGATGAAGCTAAATGTTTGGAAGTGGGTATGGATGCTTATTTAACTAAGCCAATTGACTTTAAACTTATGGAGTCTACCATTCTTTCACTCACAAAGAAGGAAACATTGACATCTGAAAAGTGA 3570 0.3863 MATKCMHVFDRFLCFVTSWKKSNTPTSRRNFQRDVEKEEFQYTSTQCLSSYYSVFVVRLAIMVMLAILIGLLTFLTWHFTKIYTTKSLNSLAYDLRYELLQRPILRMWNILNSTAEITSAQVKLSEYVIRSHSNLANQAEHVEMYEAMRAVTWALFASRKALDSITVKYSNGFVQAFHRDLKDNNTFYIYTDLAYNETNSLTAHKVLNDKDIHGNKSTIWYREQLDPVSGEKIGNAMQIAPEDSISIAGLSQVPDGVASWHVAVSKFTDSPLLSAALPVWDSSNKTIVAVVGVTTALYSVGQLMMELVDKHSGHMYLTSQKGYLLATSTNDPLLTNSTKPPKLKMAVDCDNKVIREGARWLEKTYGNNSPPSHEVRVENARLGHQQYYIDSFFLNLKRLPLVGVIIIPRKHIMGQADQRAFKTLVILISASLCIIAIGCVCILILTNGVSKEMKLRAELISHLEARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILMSDDHLTNEQCATITQIRKCSTALLRLLNNILDLSKVESGKLVLEDAEFDLGRELEGLVDMFSVQCINHSVETILDLSDDMPKLVRGDSARVVQIFANLINNSIKFTLSGHIILRGWCENSNSYDDIESFTREQKKLGCSQKIRTKQHENHAKKSSNSDNKMILWFEVDDTGCGIDPSKWDSVFESFEQADPSTTRLHGGTGLGLCIVRSLVNKMGGEIKIVKKDGPGTLMRLYLCLNAPVDATEQHCQVDFANNGLVVLLALHGNMSRIITSKWLQKNAVVTIEASEWNGLTQILRELFNARTSTHNNDFDSHYASHEVMKSKFLSIQELTNPTFLIAVDIDLLDLSTDIWKEQLNFLHKYSARARFVWLQNYDSGNTIKTELRKKGYILTVNKPLYKTKMIHILEDVIKERNFGLQKKNMIIPRTTTKEGDLHESFEIDYSHCDAASSDGSDIYEDKQKEEVVRFHPSSQYQINNCFLGLTHENKEHNDPRKEVTFSIGEKGEDSGCGETSCRVSGSSKAVNGKKSLEGLRILLAEDTPVIQRVATIMLEKMGAIVVAVGDGQQAVDALNSMFGVEDCRKESLLKERNTRTSQTEILCLPSYDLILMDCQMPKMDGYEATKEIRKSEEGTGFHIPIVALTAHAMSCDEAKCLEVGMDAYLTKPIDFKLMESTILSLTKKETLTSEK 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01621 1189 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 588 737 IPR003594 -
Car07g01621 1189 SMART REC_2 1033 1176 IPR001789 GO:0000160
Car07g01621 1189 Pfam Response regulator receiver domain 1099 1173 IPR001789 GO:0000160
Car07g01621 1189 ProSiteProfiles Histidine kinase domain profile. 482 740 IPR005467 -
Car07g01621 1189 CDD HisKA 476 537 IPR003661 GO:0000155|GO:0007165
Car07g01621 1189 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 530 736 IPR036890 -
Car07g01621 1189 SMART HisKA_10 475 541 IPR003661 GO:0000155|GO:0007165
Car07g01621 1189 Gene3D - 463 542 - -
Car07g01621 1189 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 462 542 IPR036097 GO:0000155|GO:0007165
Car07g01621 1189 SMART HKATPase_4 588 740 IPR003594 -
Car07g01621 1189 Gene3D - 1016 1183 - -
Car07g01621 1189 Pfam His Kinase A (phospho-acceptor) domain 476 541 IPR003661 GO:0000155|GO:0007165
Car07g01621 1189 ProSiteProfiles Response regulatory domain profile. 1034 1180 IPR001789 GO:0000160
Car07g01621 1189 PANTHER OSMOSENSOR HISTIDINE KINASE 1 1181 - -
Car07g01621 1189 Gene3D - 543 741 IPR036890 -
Car07g01621 1189 PRINTS Bacterial sensor protein C-terminal signature 683 693 IPR004358 GO:0016310|GO:0016772
Car07g01621 1189 PRINTS Bacterial sensor protein C-terminal signature 700 718 IPR004358 GO:0016310|GO:0016772
Car07g01621 1189 PRINTS Bacterial sensor protein C-terminal signature 665 679 IPR004358 GO:0016310|GO:0016772
Car07g01621 1189 PANTHER TWO-COMPONENT HISTIDINE KINASE 1 1181 - -
Car07g01621 1189 CDD REC_hyHK_CKI1_RcsC-like 1035 1176 - -
Car07g01621 1189 SUPERFAMILY CheY-like 1031 1183 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01621 Car-Chr7 16338656 16345954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01621 8 1181 Histidine Kinase Gene Family AT2G17820 63.690 0.0 1500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Car07g01621 HATPase_c 7.4e-22 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01621 - - gmx:100801970 1917.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00682 08 5943438 5950662 Car07g01621 07 16338656 16345954 PCT