Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01611 ATGTGGACCCCACTCTTCCTATATATCACAACCCGATACTCATCATCTTCAACTTACAATAACGACGTCGTATTTATCATGATCTCAACATCATTTCCCACACCTCTCAGCACCACCGCCACTTTCTCCGGCAAATCCATTTCACCACAATCGTGCCACGTCAGATCCAGGCAAGTACTAATCTCTGCAACAGCCACCGCCACTCGGCCTTCGTATCTGCAGCTTCATCAAAGTATGGCTTCCTGCACGTCGACACATTACGAGATTCTCGGAGTTGCTGCCGTCGCTTCTAATCGAGAGATCAAAGCGGCGTACCGGAGACTCGCGAGGGTTTCTCATCCTGACGTGGCGGCGGTTGATCGGAAGGACTCTTCGGCGGATAAGTTTATGAAGATTCATGCTGCGTACTCCACGTTGTCAGATCCTGAGAAGCGTGCCAGTTATGATAGAAGCTTGTTCCGGCAACGGCAACCGTTGATGGCGACGAGATTTTCTGGATACCATAACCGGAATTGGGAAACGGATCAATGTTGGTAG 537 0.4991 MWTPLFLYITTRYSSSSTYNNDVVFIMISTSFPTPLSTTATFSGKSISPQSCHVRSRQVLISATATATRPSYLQLHQSMASCTSTHYEILGVAAVASNREIKAAYRRLARVSHPDVAAVDRKDSSADKFMKIHAAYSTLSDPEKRASYDRSLFRQRQPLMATRFSGYHNRNWETDQCW 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01611 178 ProSitePatterns Nt-dnaJ domain signature. 129 148 IPR018253 -
Car07g01611 178 ProSiteProfiles dnaJ domain profile. 85 152 IPR001623 -
Car07g01611 178 PANTHER - 30 178 - -
Car07g01611 178 Pfam DnaJ domain 85 149 IPR001623 -
Car07g01611 178 SMART dnaj_3 84 144 IPR001623 -
Car07g01611 178 CDD DnaJ 85 141 IPR001623 -
Car07g01611 178 PRINTS DnaJ domain signature 87 105 IPR001623 -
Car07g01611 178 PRINTS DnaJ domain signature 105 120 IPR001623 -
Car07g01611 178 PRINTS DnaJ domain signature 124 144 IPR001623 -
Car07g01611 178 SUPERFAMILY Chaperone J-domain 40 148 IPR036869 -
Car07g01611 178 Gene3D DnaJ domain 72 172 IPR036869 -
Car07g01611 178 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 30 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01611 Car-Chr7 16160810 16161693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01611 86 149 C2H2 Transcription Factor Family AT1G74250 42.647 3.58e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01611 - - cam:101494220 356.295