Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01608 ATGACTGCCGAAACAGGAACTTACCGATGGATGGCACCAGAGTTGTACAGTACCGTAACATTGCGCCAAGGAGAGAAAAAGCACTATAACAACAAGGTTGATGTGTATAGCTTTGAGATTGTTTTGTGGGAGCTACTAACAAATCGCATGCCTTTTGAAGGAATGTCTAATTTACAAGCTGCTTATGCTGCTGCCTTCAAGGTTGGGCAGTGCTGCCCGGAGTTTAGGCACAATGTCAGGTTTGAGCTGAGCTTGTCTTCTTAG 264 0.4508 MTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFEIVLWELLTNRMPFEGMSNLQAAYAAAFKVGQCCPEFRHNVRFELSLSS 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01608 87 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 3 68 - -
Car07g01608 87 PANTHER SERINE-THREONINE PROTEIN KINASE 3 68 - -
Car07g01608 87 ProSiteProfiles Protein kinase domain profile. 1 87 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01608 87 Pfam Protein kinase domain 2 62 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01608 87 Gene3D Transferase(Phosphotransferase) domain 1 1 84 - -
Car07g01608 87 SUPERFAMILY Protein kinase-like (PK-like) 2 74 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01608 Car-Chr7 16143480 16144169 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01608 1 67 MAP Kinase Kinase Kinase AT5G01850 98.507 1.62e-43 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Car07g01608 Pkinase 1.9e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01608 - - cam:105852496 140.969