Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01597 ATGAAGGAGTCAGTTGTCCCACCTGAATTTCGGTTTCATCCAACAGATGGGGAGCTTGTTGATTATTATTTGAGAAAGAAAGTAGCTTCTCAGAATATTGATCTTGATGTTATCAAAGACATTGATCTATATCGTATTGAACCATGGGATCTCCAAGAGAGATGCAAAATTGGGAATGAGGAGCAACATGAGTGGTATTTTTTTAGTCACAAAGATAAGAAATATCCAACGGGGACGAGAACCAATAGAGCTACAATGGCAGGGTTTTGGAAAGCAACAGGAAGAGATAAGTCAGTGTATGAAAGAACAAAATTAATTGGCATGAGGAAGACCTTAGTTTTCTATAAAGGTAGAGCTCCTAATGGACACAAAACTGATTGGATCATGCATGAGTATAGGCTTCAAACACTTCAAAATGCACCTCCACAGGAGGAAGGGTGGGTTGTGTGTAAAGCATTCAAGAAAAAAACCAATGTCCAAACAAAGACTAATGAAAGATGGGATCCAAGCAACTTATATGATGATGAAGAAGTAAGTGGCATCATCTCAAGGGTGGACCCCATTGACCTTATCATAAGGCAGCCTCAGAGGATTTCAGCTCAAAATTTCTTGTACAAGCAAGAAATAGAACCAGAAGCAAATAACTTAGCCTTCATGATGCATTCAGACCAATTATTAGTACCTCTTCCTCAGCTAGAAAGTCCCTCTTTGCAATCAAAAAGACAAAATTCGATGTCAATAATATCAGAAAATAATAACAATGATGATAGTTTATATTCCAAAATCAAGAGCAAAGAGAAAGTGACTGATTGGAGGGATCTTGACAAGTTTGTGGCTTCTCAGCTGAGTCAAGAAGATAGGTGCCATGATCATACAAGCTCAGACATGGCATTGTTGCTATTGCAAAGTAGTAGGAATGAAGAAGAGAACAAGTTTAGTTCATTTTTTACTACAAGCCCTGACTGTGACTTTGGGATATGTGTATTTGAAAAATACATTAATGAATAA 1008 0.375 MKESVVPPEFRFHPTDGELVDYYLRKKVASQNIDLDVIKDIDLYRIEPWDLQERCKIGNEEQHEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKSVYERTKLIGMRKTLVFYKGRAPNGHKTDWIMHEYRLQTLQNAPPQEEGWVVCKAFKKKTNVQTKTNERWDPSNLYDDEEVSGIISRVDPIDLIIRQPQRISAQNFLYKQEIEPEANNLAFMMHSDQLLVPLPQLESPSLQSKRQNSMSIISENNNNDDSLYSKIKSKEKVTDWRDLDKFVASQLSQEDRCHDHTSSDMALLLLQSSRNEEENKFSSFFTTSPDCDFGICVFEKYINE 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01597 335 SUPERFAMILY NAC domain 4 155 IPR036093 GO:0003677|GO:0006355
Car07g01597 335 Pfam No apical meristem (NAM) protein 7 134 IPR003441 GO:0003677|GO:0006355
Car07g01597 335 PANTHER NAC DOMAIN-CONTAINING PROTEIN 76 4 297 - -
Car07g01597 335 Gene3D NAC domain 15 160 IPR036093 GO:0003677|GO:0006355
Car07g01597 335 ProSiteProfiles NAC domain profile. 6 155 IPR003441 GO:0003677|GO:0006355
Car07g01597 335 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01597 Car-Chr7 15995531 15999606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01597 1 330 NAC Transcription Factor Family AT2G18060 55.191 3.32e-135 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car07g01597 NAM 4.5e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01597 - - aprc:113869508 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00656 08 5662841 5667011 Car07g01597 07 15995531 15999606 PCT