Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01586 ATGGAGTGTGTTGAAGCACAAGCAGCTTTAAAAAGCAGTTTTATCAAAACCACCACCGTCAAACTCACTCCACAAACATTGTTACAAGAGCTGTCAACTTTTAATGTCCAAAACGTAACTCCTGTCGAAGATTTCTTTGTCGACGATTTCCTTAACTTTTCCgaagaagaagaagatgaaaaagatgaaAACTTTATCGATAaaaaacaacaaccccaacaacaaaaccaaaacgaaagccaccaAATTTTCCACCCCATAATCAACGACCATTTTGCTTCATTACCCACCACAGAACTCACAGTTCCGGTAGAAGAAGCTGCTGATTTAGAATGGTTATCTTATTTCGTTGAAGATTCCTTCTCAGAATTCTCCACAACAGAGAATCTTCAACTTCAATTTCAAGCAAAAGCTCCTGAACCAAAACCCACGTTTTCAACTCCGTGTTTCAAAACTCCAGTTCCGGCGAAAGCAAGAAGCAAGAGAACAAGAACCGGCGTTCGTGTATGGCCAATTTCATTCGTGGATTCATCTTCAACTTCAAGTTCAACCACCCTTTCTTCTTCCTCCACACACCTCGACGAGTGTTCGAAGCCGCCGGAGAAAAAGACGAAGAGAATGGCTTCGCTTGACGGAGAAGGTAGAAACGTTTCGCGGCGGTGTAACCATTGTGGTGTTCAGAAAACTCCTCAGTGGCGAACCGGTCCGCTTGGACCGAAAACGCTTTGTAATGCTTGTGGGGTCCGGTTTAAATCGGGTCGGTTATTACCCGAATATAGACCCGCTTGTAGTCCGACATTTTCGAGTGAATTGCATTCTAATCATCACCGGAAAGTGTTGGAGATGCGGCGGAAGAAGGAGGGTGTTCCCGGTTCGCCACTTCCTCCGGTTGCTCCCGGttttttaatttaa 912 0.4134 MECVEAQAALKSSFIKTTTVKLTPQTLLQELSTFNVQNVTPVEDFFVDDFLNFSEEEEDEKDENFIDKKQQPQQQNQNESHQIFHPIINDHFASLPTTELTVPVEEAADLEWLSYFVEDSFSEFSTTENLQLQFQAKAPEPKPTFSTPCFKTPVPAKARSKRTRTGVRVWPISFVDSSSTSSSTTLSSSSTHLDECSKPPEKKTKRMASLDGEGRNVSRRCNHCGVQKTPQWRTGPLGPKTLCNACGVRFKSGRLLPEYRPACSPTFSSELHSNHHRKVLEMRRKKEGVPGSPLPPVAPGFLI 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01586 303 PIRSF Txn_fac_GATA_plant 1 291 IPR016679 GO:0003677|GO:0005634|GO:0045893
Car07g01586 303 MobiDBLite consensus disorder prediction 176 214 - -
Car07g01586 303 MobiDBLite consensus disorder prediction 142 162 - -
Car07g01586 303 PANTHER GATA TRANSCRIPTION FACTOR 1 287 - -
Car07g01586 303 Gene3D - 212 288 IPR013088 GO:0006355|GO:0008270
Car07g01586 303 MobiDBLite consensus disorder prediction 195 214 - -
Car07g01586 303 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 216 277 - -
Car07g01586 303 SMART GATA_3 215 269 IPR000679 GO:0006355|GO:0043565
Car07g01586 303 MobiDBLite consensus disorder prediction 57 79 - -
Car07g01586 303 Pfam GATA zinc finger 221 255 IPR000679 GO:0006355|GO:0043565
Car07g01586 303 ProSitePatterns GATA-type zinc finger domain. 221 246 IPR000679 GO:0006355|GO:0043565
Car07g01586 303 PANTHER GATA TRANSCRIPTION FACTOR 1 287 - -
Car07g01586 303 ProSiteProfiles GATA-type zinc finger domain profile. 215 251 IPR000679 GO:0006355|GO:0043565
Car07g01586 303 CDD ZnF_GATA 220 268 IPR000679 GO:0006355|GO:0043565
Car07g01586 303 MobiDBLite consensus disorder prediction 176 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01586 Car-Chr7 15862951 15864512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01586 7 287 C2C2-Gata Transcription Factor Family AT5G66320 47.785 6.86e-72 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Car07g01586 GATA 8e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01586 - - cam:101512459 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00644 08 5504566 5506278 Car07g01586 07 15862951 15864512 PCT