Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01527 ATGCCTCCCTCTCACAACTCATCTCCAGATAACGCCACACCCGATAATGCCACACCTGATAATGCGACCCCTGATGACGCTGATGGATCATCCAAACAATCTGGTTCGTCACATAAAGCAGTTTCATCAAATGAAAAATCGCATAAAAACAATAATTCCAACGATGATGATAGTAAGGCATTAGTTGGAGCTGCTCTTGGAGCAGGGTTTGTCCTTCTTCTCCTTCTTGTTTTTTGTTTCATTTGGTCCAGGAGGAAGAAGAGAAAGCAAAATTACTATTATGGTCCTGGAGATCCTTCCCTTGGACAAGGGAGTAATTACTACCACAGTGGACAACATCCTCATCCCAATTGGCAAGGAGGGCCAGGCCCACATGGGATGGATCATGTTGTTAGAGTAAATGGAATGGGCCCACCAAGTGGTGTTTGGGGTGCACCACACCCTCTAATGAATAGTGGTGATATGAGTGGCAATTACTCATTGGGTATGGGCCCAGGTGCTATGCCTCCTCCTTCTCCGGGCCTGTCTCTTACTCTCAAGGGTGGTACCTTCTCTTATGAGGAATTGGCATCAGCTACGAAAGGATTTGCTAATGAGAATATTATAGGACAAGGTGGTTTTGGTTATGTTCATAAGGGAATATTGCCTAATGGAAAGGAAGTTGCTGTTAAAAGTTTAAAATCTGGTAGTGGGCAAGGAGAACGCGAGTTCCAGGCTGAGATCGACATCATTAGTCGTGTTCATCATCGTCATCTTGTGTCGCTTGTTGGATATTCTATTTCTGGTGGACAGAGAATGTTGGTCTATGAATTTGTTCCAAATCAAACTTTGGAACATCACCTTCATGGAAAGGGTGTGCCTACTATGGATTGGCCCACTAGAATGAAAATTGCACTAGGATCTGCTAGAGGGCTTGCTTACCTTCATGAAGATTGTAGTCCTCGCATTATCCACCGTGATATTAAGGCTTCAAATGTCCTAATTGATGACAGCTTCGAAGCTAAGGTGGCTGATTTTGGATTGGCTAAATTGACTACGGATAATAATACACATGTCTCAACTCGTGTCATGGGAACATTCGGATACATGGCCCCTGAATATGCATCAAGTGGAAAATTGACAGAGAAATCTGATGTTTTTTCATTTGGGGTCATGCTACTAGAACTCTTAACTGGGAAGCGACCGTTGGATTTGACCAATGCCATGGATGAAAGTTTAGTTGATTGGGCTCGACCACTCTTGAATCGTGCATTGGAGGAGGATGGAAACTTTAGAGAATTGGTGGATCCATTTTTGGAAGGAAACTATAATCATCAAGAAATGATAAGAATGGCAGCTTGTGCTGCTAGTAGCATTCGTCATTCTGCCAAGAAGCGTTCAAAAATGAGTCAGATTGTAAGAGCATTGGAAGGAGATGTGTCACTAGAAGATTTAAAGGAGGGGATGATGAAAACTTCAGGGAATAGCAGCGCTTATACCTCCTCAGCTGGGAGCTCAGACTATGATACCGTGCAATACAATGCTGATATGATGAAATTCAGAAAGGCAATTATGTCGAGTCAGGAATTTGGTGAATAG 1578 0.4309 MPPSHNSSPDNATPDNATPDNATPDDADGSSKQSGSSHKAVSSNEKSHKNNNSNDDDSKALVGAALGAGFVLLLLLVFCFIWSRRKKRKQNYYYGPGDPSLGQGSNYYHSGQHPHPNWQGGPGPHGMDHVVRVNGMGPPSGVWGAPHPLMNSGDMSGNYSLGMGPGAMPPPSPGLSLTLKGGTFSYEELASATKGFANENIIGQGGFGYVHKGILPNGKEVAVKSLKSGSGQGEREFQAEIDIISRVHHRHLVSLVGYSISGGQRMLVYEFVPNQTLEHHLHGKGVPTMDWPTRMKIALGSARGLAYLHEDCSPRIIHRDIKASNVLIDDSFEAKVADFGLAKLTTDNNTHVSTRVMGTFGYMAPEYASSGKLTEKSDVFSFGVMLLELLTGKRPLDLTNAMDESLVDWARPLLNRALEEDGNFRELVDPFLEGNYNHQEMIRMAACAASSIRHSAKKRSKMSQIVRALEGDVSLEDLKEGMMKTSGNSSAYTSSAGSSDYDTVQYNADMMKFRKAIMSSQEFGE 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01527 525 MobiDBLite consensus disorder prediction 8 41 - -
Car07g01527 525 ProSiteProfiles Protein kinase domain profile. 196 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01527 525 ProSitePatterns Protein kinases ATP-binding region signature. 202 224 IPR017441 GO:0005524
Car07g01527 525 Gene3D Transferase(Phosphotransferase) domain 1 272 489 - -
Car07g01527 525 Gene3D Phosphorylase Kinase; domain 1 176 271 - -
Car07g01527 525 PANTHER RECEPTOR-LIKE KINASE 4 524 - -
Car07g01527 525 CDD STKc_IRAK 202 471 - -
Car07g01527 525 MobiDBLite consensus disorder prediction 1 55 - -
Car07g01527 525 ProSitePatterns Serine/Threonine protein kinases active-site signature. 316 328 IPR008271 GO:0004672|GO:0006468
Car07g01527 525 SMART serkin_6 196 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01527 525 SUPERFAMILY Protein kinase-like (PK-like) 176 469 IPR011009 -
Car07g01527 525 Pfam Protein tyrosine and serine/threonine kinase 199 398 IPR001245 GO:0004672|GO:0006468
Car07g01527 525 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 4 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01527 Car-Chr7 15035739 15039344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01527 59 515 Trihelix Transcription Factor Family AT1G70460 51.188 1.15e-147 438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Car07g01527 PK_Tyr_Ser-Thr 5.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01527 - - gmx:100805872 737.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00583 08 4950584 4955373 Car07g01527 07 15035739 15039344 PCT