Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01522 ATGAGAGTTCCTCCTGTTTCCTCCCCACCAAAACTCACCACCCAAAACGTCGTCGTTCCCAATCCCAATCCCACTTCCAATCCCAACTcaacaacaacaacaaccaccacCTTGTGCTACGAGCCCAGGTCCGTTCTCGAACTTTGCCGCAGCCCAAGCCCAGAAAAGAAACCCACCCAACAAGAAGAAGTGGAAGAGGATCATGCTTCGTTGCCTAATTTGGATTGGTGGGATTCTATCATGAAAGATTTGGGCTTACAAGACGACTCTTCCACACCCATACCTCTTTTGAAAAACACTAATATTAATACCCACGAAACTTCTAACCCATGTATCCCTGAAATTTACCCCAACCCTTCTCACGACCAATTCGATCAACCTCAAGACTTCACTACTCTCTCAGATATTTACTCTAATCAAAACCTGGCATACAATTATCCAAACACAAACACTAATCTCGATCATTTGGTTAATGACTTCAATAATAACAGTAATTGGGATTTCATTGAAGAGCTTATCCGTGCAGCAGATTGTTTCGATAACAGTCATCTACAATTAGCTCAAGCGATATTGGAGCGATTAAATCAACGGCTACGATCTCCCACTGGTAAACCTTTACACAGAGCAGCTTTTCACTTCAAAGATGCTCTTCAATCTCTTCTCTCCGGTTCCAACCGGACCAACCCTCCTCGCCTATCTTCTATGGTGGAGATTGTTCAAACCATTAGAACCTTCAAGGCCTTTTCTGGAATTTCACCGATTCCAATGTTTTCAATTTTCACCGTTAATCAAGCGCTACTCGAAGCGCTTCATGGTTCATCTTTTATGCACGTTGTTGATTTCGAAATTGGACTTGGAATTCAATACGCTTCTCTCATGAAAGAGATTGCTGAAAAGGCTGTTAACGGTTCGCCGTTACTCCATATCACTGCCGTCGTACCGGAGGAGTACGCCGTTGAAAGCCGTCTCATCCGCGAGAATCTTAATCAGTTTGCGAATGACCTTGGGATCCGCGTTCAGGTTGATTTTGTTCCGTTACGGACATTTGAAACGGTGTCGTTTAAAGCTGTTAGGTTCGTCGACGGTGAGAAGACTGCGATTCTGTTGACGCCAGCGATATTCTGCCGCCTTGGATCAGACGGTACGGCTGCGTTTCTCTCGGATATTCGGAGGATAACTCCCGGTGTGGTGGTTTTTGTTGACGGCGAGGGATGGACGGAGGCTGCAGCGGCGGCGTCATTTCGCCGTGGAGTTGTGAATAGCTTGGAGTTTTACTCGATGATGCTGGAGTCGCTGGATGCTTCGGTGGCGGCGGGAGGAGGGGGAGAGTGGGCGCGGAGGATCGAGATGCTTTTGCTGCGGCCGAAGATCATTGCGGCGGTGGAAGCTGCAGGAAGAAGAACGACGCCGTGGAGAGAGGCGTTTTACGGCGCTGGTATGAGGCCGGTGCAGTTGAGTCAGTTCGCGGATTTTCAGGCAGAGTGCTTGCTGGCGAAGGTGCAAATCAGAGGCTTCCACGTGGCCAAACGGCAAGCTGAGTTGGTTCTCTTCTGGCATGAAAGGGCCATGGTTGCCACGTCAGCTTGGCGGTGTTAG 1596 0.4787 MRVPPVSSPPKLTTQNVVVPNPNPTSNPNSTTTTTTTLCYEPRSVLELCRSPSPEKKPTQQEEVEEDHASLPNLDWWDSIMKDLGLQDDSSTPIPLLKNTNINTHETSNPCIPEIYPNPSHDQFDQPQDFTTLSDIYSNQNLAYNYPNTNTNLDHLVNDFNNNSNWDFIEELIRAADCFDNSHLQLAQAILERLNQRLRSPTGKPLHRAAFHFKDALQSLLSGSNRTNPPRLSSMVEIVQTIRTFKAFSGISPIPMFSIFTVNQALLEALHGSSFMHVVDFEIGLGIQYASLMKEIAEKAVNGSPLLHITAVVPEEYAVESRLIRENLNQFANDLGIRVQVDFVPLRTFETVSFKAVRFVDGEKTAILLTPAIFCRLGSDGTAAFLSDIRRITPGVVVFVDGEGWTEAAAAASFRRGVVNSLEFYSMMLESLDASVAAGGGGEWARRIEMLLLRPKIIAAVEAAGRRTTPWREAFYGAGMRPVQLSQFADFQAECLLAKVQIRGFHVAKRQAELVLFWHERAMVATSAWRC 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01522 531 Pfam GRAS domain family 169 530 IPR005202 -
Car07g01522 531 MobiDBLite consensus disorder prediction 8 41 - -
Car07g01522 531 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 22 530 IPR005202 -
Car07g01522 531 MobiDBLite consensus disorder prediction 1 70 - -
Car07g01522 531 PANTHER SCARECROW-LIKE PROTEIN 15 22 530 - -
Car07g01522 531 ProSiteProfiles GRAS family profile. 159 530 IPR005202 -
Car07g01522 531 MobiDBLite consensus disorder prediction 56 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01522 Car-Chr7 14959054 14961361 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01522 67 530 GRAS Transcription Factor Family AT4G36710 57.143 1.05e-167 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Car07g01522 GRAS 3.8e-84 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01522 - - cam:101510420 1020.38