Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01520 ATGGATGCGCAAGCCAAGAAAAAAGCATTGTTTCGTGCCAAATTGAATGCTCAGAAGAAGGACAAACGCATAGAATCTCCCCTTGTTAGATATTTGATTGTGAGGAACGTTCCAGCATTAGGTTGCGGCGATGACTTGCTGCAACTCTTTTCATCATACGGAGAAGTAGAGGAGTGTAAGCCAATGGACGCAGAAGACTGTGAGCAATTCACCGATGTTTATTGGATCAAGTTTCGTCTTTTCAGCAATGCCAGGTTTGCGAAAAGAAAATTGGATGATTTTGTTTTCCTCGGAAACCGATTACAGGTTTCGTATGCTCCTCATTTTGAGAGTCTGTCGGATACAAAGGATAAATTGGAGGTTAGAAGAAGGGAGGTTTTAGCTCGACTGAACCCTGGAAGATCCAAAGAGACTATTGCCTCAAGCTCTAGGTCCGTAATTACATCAAGCACCAGTTGCTTATCAGAACATCTAAATCCTAATCAAAGAAATGCAGAATTTGAAGCAAAGTCAAACGACGGTAATCTTCCAAAAAGAATGGTTTCCTCTAATGAGGACTATTTTCCCTCCCGTTCCATGAATCAAACAGTGAGGTTTGTCAGGGATAAGCTTGATAAGATTCAATCCAGTGGCGAGCATCTACAAGCTGGATCAACATCAAAAAAAGCACGAGTTGATAATAGGAGGAGGATTTAA 696 0.4138 MDAQAKKKALFRAKLNAQKKDKRIESPLVRYLIVRNVPALGCGDDLLQLFSSYGEVEECKPMDAEDCEQFTDVYWIKFRLFSNARFAKRKLDDFVFLGNRLQVSYAPHFESLSDTKDKLEVRRREVLARLNPGRSKETIASSSRSVITSSTSCLSEHLNPNQRNAEFEAKSNDGNLPKRMVSSNEDYFPSRSMNQTVRFVRDKLDKIQSSGEHLQAGSTSKKARVDNRRRI 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01520 231 MobiDBLite consensus disorder prediction 208 231 - -
Car07g01520 231 PANTHER UNCHARACTERIZED 30 231 IPR039599 -
Car07g01520 231 Gene3D - 2 144 IPR012677 -
Car07g01520 231 SUPERFAMILY RNA-binding domain, RBD 28 110 IPR035979 GO:0003676
Car07g01520 231 MobiDBLite consensus disorder prediction 151 169 - -
Car07g01520 231 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 30 108 IPR000504 GO:0003723
Car07g01520 231 MobiDBLite consensus disorder prediction 151 188 - -
Car07g01520 231 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 32 101 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01520 Car-Chr7 14939649 14944806 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01520 1 31 C2H2 Transcription Factor Family AT3G02860 83.871 2.92e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01520 K24824 - gmx:100527829 298.516