Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01518 ATGGGGACTAAGGAGGATAGCACAACTAAACCTTCTAAATCACCTTCATCAACTCAGGAGGTACCAACAGTACAACCATCATATCCAGATTGGTCAAACTCCATGCAGGCCTACTATGCACCTGGAGCCGGTCCGCCTCCCTATTTTGCATCAACTGTTGCTTCACCAACCCCCCATCCGTATATGTGGGGAGGCCAGCATCCTTTAATGGCGCCATATGGGACTCCAGTCCCATATCCAGCTATGTACCCTCCCGGGAACATGTATGCTCATCCGGGCATGGTCATGACTCCAAGTGCTATGCACCAACCTACAGAGTTTGAAGGGAAAGGACCTGATGGAAAGGATAAGGATTCATCTAAAAAATCGAAGGGAACTCCTGCAAATACATGTGCAAAAGCAGGAGAGAGTGGAAAGGCAGGCTCAGGTTCAGGCAATGACGGCTTTTCACAAAGTGCTGAAAGTGGTTCAGAGGGTTCATCAAATGCTAGTGATGAGAATACTAACCAACAGGAATCGGCTAGAAACAAGAAGGGAAGCTTTGACCTCATGCTTGTTGATGGAGCTAATGCACAGAACAATACTGCTGGACCCATTTCTCAATCATCTGTTCCTGGACAACCTGTTGTTTCGATGCCTGCGACTAATCTTAATATTGGTATGGACTTATGGAATGCATCTTCTGCTGGTGCTGAAGCCGCAAAAATGAGGCACAATCAATCCGGTGCCCCTGGAGCTGCTGGTGAACATTGGATGCAAGATGACCGTGAGCTGAAACGACAGAAGAGAAAACAGTCTAATCGAGAGTCGGCTAGGAGGTCAAGATTACGCAAGCAGGCTGAGTGTGAAGAGCTACAAAAGAGGGTCGAGGTGCTGGGAGGTGAGAATCGAACTCTGAGAGAAGAGCTTCAGAAACTTTCTGAAGAATGTGAGAAGCTTACATCTGAAAACAATTCTATCAAGGAAGAGTTGGAACGGTTGTGTGGGCCAGAAGTAGTTGCTAACCTTGAATGA 1014 0.4714 MGTKEDSTTKPSKSPSSTQEVPTVQPSYPDWSNSMQAYYAPGAGPPPYFASTVASPTPHPYMWGGQHPLMAPYGTPVPYPAMYPPGNMYAHPGMVMTPSAMHQPTEFEGKGPDGKDKDSSKKSKGTPANTCAKAGESGKAGSGSGNDGFSQSAESGSEGSSNASDENTNQQESARNKKGSFDLMLVDGANAQNNTAGPISQSSVPGQPVVSMPATNLNIGMDLWNASSAGAEAAKMRHNQSGAPGAAGEHWMQDDRELKRQKRKQSNRESARRSRLRKQAECEELQKRVEVLGGENRTLREELQKLSEECEKLTSENNSIKEELERLCGPEVVANLE 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01518 337 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 337 IPR044827 GO:0003700|GO:0006355|GO:0043565
Car07g01518 337 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 262 277 IPR004827 GO:0003700|GO:0006355
Car07g01518 337 SMART brlzneu 255 319 IPR004827 GO:0003700|GO:0006355
Car07g01518 337 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 257 320 IPR004827 GO:0003700|GO:0006355
Car07g01518 337 MobiDBLite consensus disorder prediction 250 264 - -
Car07g01518 337 Coils Coil 268 323 - -
Car07g01518 337 Gene3D - 258 312 - -
Car07g01518 337 CDD bZIP_plant_GBF1 260 310 IPR045314 GO:0003700|GO:0006355
Car07g01518 337 Pfam bZIP transcription factor 256 317 IPR004827 GO:0003700|GO:0006355
Car07g01518 337 Pfam G-box binding protein MFMR 1 94 IPR012900 -
Car07g01518 337 SUPERFAMILY Leucine zipper domain 258 314 IPR046347 GO:0003700|GO:0006355
Car07g01518 337 MobiDBLite consensus disorder prediction 231 279 - -
Car07g01518 337 MobiDBLite consensus disorder prediction 108 123 - -
Car07g01518 337 MobiDBLite consensus disorder prediction 1 36 - -
Car07g01518 337 MobiDBLite consensus disorder prediction 143 177 - -
Car07g01518 337 MobiDBLite consensus disorder prediction 192 213 - -
Car07g01518 337 MobiDBLite consensus disorder prediction 99 180 - -
Car07g01518 337 PANTHER G-BOX-BINDING FACTOR 1 1 337 - -
Car07g01518 337 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01518 Car-Chr7 14928206 14933884 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01518 1 337 bZIP Transcription Factor Family AT4G36730 55.556 7.20e-109 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car07g01518 MFMR 5.5e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01518 K09060 - gmx:778191 529.25