Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01517 ATGGAACAGAGATATCGACTCTTGTCTCTCTCAAACTCTGATTTAATCTTACAGCGCTCACTCTCATTAATTTATGCCTCATATGAAAATGAACATAGAGAAAGCAACGATGGAATCGCGAATAAAGACAAAGATTTTGTTTTCGATATTCATCCAAGCTTACTTGTGGACACTAGTAAACTAATCATTGACAAATTTGTTGGAGAAGGGTCTCATTTCATTCTCTATAAAGGATGGTATCGATTGGATCCTGTCTCTATAAAGGTAATGCTTCCAAAAAATACATTAGATGCTACTTATGAATGCAAAGCAAAATTTCAACGCGAGGTGAACTTGATATCAAGGATTAAACATCAAAATATTGTCAAGTTTATTGGAGCCTGTGTGGAACCATCGATGATGATAATCACAGAATTTTTGGAAGGTGGTTCACTTCAAAAACACTTAGAGAACATTTATCCGAGGACTCTAGATTTGGAACAATCTTTAAGTTTTGCTCTCGATATTTCTCAAGCCATGGAGTATTTGCATGCAAATGACATCATTCATCGTGATCTAAAGCCTGGTAATCTTGTTCTTGCTGAAGACAAGATGCATATCAAGCTTTCAGAGTTTGGAATGGCCAGAGAAGAGATATGTGGTGAAATGACTTCTGAGGCTGGTACTTACCGATATATGGCTCCTGAGTTATTAAGCAAGGAGCCACTTCCAAAGGGAGAAAAGAAATGCTATGATCACAAGGCAGATGTGTATAGTTTTGCATTAGTTCTATGGGGGTTGACAAAAAATCAAATTCCATTTAAAGGAAGGAGTGAATTGATGGCAGCATATGCGGCAGTAAGAAACATGAGACCAAGTGTGGATGAGTTTCCAAATGATCTACTTCCCCTGTTGCAGTCCTGTTGGGCAGAAAACCCGAATCTCCGGCCGGAATTCGCCGAGATCACAAATATTCTGACACAGGTTCTCCAAAACTTCCAGACAAAAAGAACAACAGCACCTCTGCAAGAAGCTGTCTCAAAACATATGATAGATGAAGGTCAGAGTAAGAAGAACTCTAGTGGTTGCAGCACAGAGAAACAGTTTCATAGTATAAAAGTGAGTGCTAGTGCATGCTTACCACAAAGCAAGTTGAAAAAGAAAATTAATAAGTACAAGTCTTTAGTGCTTCGTTTCAGCAGATGCTTTGCCAGTTTTTGA 1200 0.3842 MEQRYRLLSLSNSDLILQRSLSLIYASYENEHRESNDGIANKDKDFVFDIHPSLLVDTSKLIIDKFVGEGSHFILYKGWYRLDPVSIKVMLPKNTLDATYECKAKFQREVNLISRIKHQNIVKFIGACVEPSMMIITEFLEGGSLQKHLENIYPRTLDLEQSLSFALDISQAMEYLHANDIIHRDLKPGNLVLAEDKMHIKLSEFGMAREEICGEMTSEAGTYRYMAPELLSKEPLPKGEKKCYDHKADVYSFALVLWGLTKNQIPFKGRSELMAAYAAVRNMRPSVDEFPNDLLPLLQSCWAENPNLRPEFAEITNILTQVLQNFQTKRTTAPLQEAVSKHMIDEGQSKKNSSGCSTEKQFHSIKVSASACLPQSKLKKKINKYKSLVLRFSRCFASF 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01517 399 CDD STKc_MAP3K-like 67 319 - -
Car07g01517 399 Pfam Protein tyrosine and serine/threonine kinase 63 319 IPR001245 GO:0004672|GO:0006468
Car07g01517 399 SUPERFAMILY Protein kinase-like (PK-like) 53 342 IPR011009 -
Car07g01517 399 SMART serkin_6 61 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01517 399 PANTHER PROTEIN KINASE ATN1-LIKE PROTEIN-RELATED 29 350 - -
Car07g01517 399 Gene3D Transferase(Phosphotransferase) domain 1 42 357 - -
Car07g01517 399 PRINTS Tyrosine kinase catalytic domain signature 137 150 IPR001245 GO:0004672|GO:0006468
Car07g01517 399 PRINTS Tyrosine kinase catalytic domain signature 175 193 IPR001245 GO:0004672|GO:0006468
Car07g01517 399 PRINTS Tyrosine kinase catalytic domain signature 248 270 IPR001245 GO:0004672|GO:0006468
Car07g01517 399 PRINTS Tyrosine kinase catalytic domain signature 290 312 IPR001245 GO:0004672|GO:0006468
Car07g01517 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Car07g01517 399 PANTHER SERINE-THREONINE PROTEIN KINASE 29 350 - -
Car07g01517 399 ProSiteProfiles Protein kinase domain profile. 61 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01517 Car-Chr7 14923123 14926426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01517 46 328 MAP Kinase Kinase Kinase AT5G66710 54.930 2.67e-113 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Car07g01517 PK_Tyr_Ser-Thr 9.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01517 - K04427 pvu:PHAVU_003G251900g 439.884