Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01509 ATGGATCCTAGTGACCACCTCTTAAATCCAAGACCGGACACCTTGAAATATGGAGCTTTTTGCATTCATGGAAAAGTTTGGATCATATTTCAAAAGGACATTATCATTAGACTTGAGAGACCCTTTCGCATTAGTAGTTTCGCCATTGTTGATGGTCGAGGCAACAAACATAATCATCCACAAAATTTGGATTCATCATTATCGACGTCAACCTCCCGGAACGGTGATGGGTCCCAATGGAAAGATAATATCATTGGATCAAGTTCTAATAAGGTGACAATCTCCAACAATTGGTTTAGGGAGCAAAATAAGGTTATACTTTTTGGACATAATGATAGATTTGTGAGAGATAAAAACATGAAAGCCATTGTGGTATATAATTACTTTGGACCTAATAGCCACCAACACACGCCTAGATTTCGTCATGGATATGCACGTGTTGCGAACAATATATACATGAGATGGGTGCAATATGCAATAAGTGGAACCAAGGAACCAAGCCTTAAAAGACAATCAAACCTCTTCATAGCACCATCGACGGGGAATAAAAAGGCGACATGA 561 0.3904 MDPSDHLLNPRPDTLKYGAFCIHGKVWIIFQKDIIIRLERPFRISSFAIVDGRGNKHNHPQNLDSSLSTSTSRNGDGSQWKDNIIGSSSNKVTISNNWFREQNKVILFGHNDRFVRDKNMKAIVVYNYFGPNSHQHTPRFRHGYARVANNIYMRWVQYAISGTKEPSLKRQSNLFIAPSTGNKKAT 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01509 186 MobiDBLite consensus disorder prediction 59 82 - -
Car07g01509 186 PANTHER PECTATE LYASE 1 56 - -
Car07g01509 186 PANTHER PECTATE LYASE 18-RELATED 1 56 IPR045032 GO:0030570
Car07g01509 186 PANTHER PECTATE LYASE 18-RELATED 88 186 IPR045032 GO:0030570
Car07g01509 186 MobiDBLite consensus disorder prediction 58 82 - -
Car07g01509 186 Pfam Pectate lyase 84 175 IPR002022 -
Car07g01509 186 PANTHER PECTATE LYASE 88 186 - -
Car07g01509 186 SMART amb_all 33 181 IPR002022 -
Car07g01509 186 SUPERFAMILY Pectin lyase-like 6 184 IPR011050 -
Car07g01509 186 Gene3D - 66 186 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01509 Car-Chr7 14765602 14766982 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01509 2 185 Polysaccharide Lyase AT5G09280 39.485 3.60e-53 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01509 K01728 - gmx:100811216 188.734