Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01507 ATGGTTTCTTCCTTCCTTCCATCTCACACTCTATTTTTTGCACTCATGTTCTTTTCTGCCACCCATATCCTACTTCAATTGCCACAAATCAATGGAACAAACTTCTCACACCCTTTGAATTCCCCTCCTTCCTGTCACACATATGCTGCATACCATGCTCACTCTCCAAATTTCTTAACCCTCACAAGCATATCCGATATATTTGACACCAGTCCTCTATCCATTGCAAGAGCAAGTAACATAAAAGATGAAAATAAAGAACTAATTCCAGGCCAACTTTTACTGGTACCTATAACTTGTGCTTGCAGTGGAAATGGAAACTACTCTTCTGCTAATATCTCACACTTCATCAAACAAGGTGAAAGTTACTACTATCTTTCAACCATTTCATTTCAGAATCTCACTAATTGGCAAACAGTAGAAGATTCAAACCCCAACCTGAATCCATATTTGTTGAAATTAGGCACCAAAATAGTCATCCCTTTGTTATGTAAATGCCCTTCAAACTATCAGTTTGAAAAAGGGATAGAATATGTGATTACTTATGTGTGGCAGCCTAATGACAATGTTACCCTTGTAGCTTCCAAGTTTGGTGCATTACCACATGACATAATCACTGCAAATGCAAACAACTTTGGTCAGAACTTCACTACTGCAACCAATCTTCCAGTTTTTATCCCAGTGACAAATTTACCAGTTATTTCTCAATCATACTACTATTCAAGTGAAAGAAAGAGAAGCAATCATTTTCCTATTATCATTGCCATTGGTATGAGTCTAGTATGCACTCTTTTGATTTCATTATCATTAATGGTTTGTGTTTATTGTTGGAGGAAGAGAAAGGCTTGTGAGAATAGGTGTGTGCCTTCTGTGGAGATAGCAAATAAGTTAATTTCTGAAATTTCAAACTATGTAAGTAAGCCAAAAGTGTATCAAGTTGATATAATTATGGAAGCTACCATGAACCTCAACGAACAGTGTAAGATAGGTGAATCAGTATACAAAGGTAAAATAGATGGTTTAGTTTTAGCTGTGAAAAATGTTAAGGAGAAGGTCACAGTCACAGAAGAATTGATGATTCTACAGAAAGTAAATCATACAAATCTGGTGAAACTAATAGGTGTCTCTTCAGGATATGATGGAAACCATTTCCTTGTATATGAATATGCTGAAAATGGGTCTCTTTATAATTGGTTGTTCTCTGAGTTTTCCACTTCTTCAAGCTCAGGAGTTTTCCTCACTTGGAGTCAGAGGTTAAGCATAGCGGTCGATGTTGCGATGGGTCTGCAATACATGCATGAACACACACAACCAAGGATAGTCCATAGGGACATCACATCAAGTAACATCCTTCTTAACTCAAACTTTAAGGCCAAGATAGCGAATTTTTCGGCTGCAAGAACTACAAAGGATCCTATGATAACAAAAGTTGATGTATTTGCTTATGGGGTGGTTCTGTTGGAATTACTGACAGGAAAGAAGTCGTTGTCATATAGTGAAAATGGTGAGGTGAATATGTCGTGGAAAGATATTAGGGAGATTTTTGATATAGAAGAGAAGAGAGATGAAAGGCTTAGAAGATGGATAGATCCTTTGTTAGGGAGGTTTTTTAATGTTGTTGAAGTTCTTAGCTTGGCCTCTATAGCAGTGAATTGCACTAAAGAACAACCTTTGTCAAGACCAACTATGGGAGAAGTTGTTCTTAGCCTTTCTCTTCTCACTCAACACTCTACTACCACATTAGAAAGATCATGGAATTTTGGATTAGATCTAGAGGATACTGGAATGGTTACTCCCATCACAGCTCGTTGA 1812 0.3725 MVSSFLPSHTLFFALMFFSATHILLQLPQINGTNFSHPLNSPPSCHTYAAYHAHSPNFLTLTSISDIFDTSPLSIARASNIKDENKELIPGQLLLVPITCACSGNGNYSSANISHFIKQGESYYYLSTISFQNLTNWQTVEDSNPNLNPYLLKLGTKIVIPLLCKCPSNYQFEKGIEYVITYVWQPNDNVTLVASKFGALPHDIITANANNFGQNFTTATNLPVFIPVTNLPVISQSYYYSSERKRSNHFPIIIAIGMSLVCTLLISLSLMVCVYCWRKRKACENRCVPSVEIANKLISEISNYVSKPKVYQVDIIMEATMNLNEQCKIGESVYKGKIDGLVLAVKNVKEKVTVTEELMILQKVNHTNLVKLIGVSSGYDGNHFLVYEYAENGSLYNWLFSEFSTSSSSGVFLTWSQRLSIAVDVAMGLQYMHEHTQPRIVHRDITSSNILLNSNFKAKIANFSAARTTKDPMITKVDVFAYGVVLLELLTGKKSLSYSENGEVNMSWKDIREIFDIEEKRDERLRRWIDPLLGRFFNVVEVLSLASIAVNCTKEQPLSRPTMGEVVLSLSLLTQHSTTTLERSWNFGLDLEDTGMVTPITAR 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01507 603 PANTHER SERINE/THREONINE RECEPTOR-LIKE KINASE NFP 17 603 - -
Car07g01507 603 CDD LysM 113 160 IPR018392 -
Car07g01507 603 SUPERFAMILY Protein kinase-like (PK-like) 305 570 IPR011009 -
Car07g01507 603 Gene3D Phosphorylase Kinase; domain 1 294 389 - -
Car07g01507 603 Pfam Protein tyrosine and serine/threonine kinase 343 469 IPR001245 GO:0004672|GO:0006468
Car07g01507 603 ProSiteProfiles Protein kinase domain profile. 299 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01507 603 Pfam LysM domain 117 161 IPR018392 -
Car07g01507 603 Pfam LysM domain 60 97 IPR018392 -
Car07g01507 603 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 17 603 - -
Car07g01507 603 Gene3D Transferase(Phosphotransferase) domain 1 473 588 - -
Car07g01507 603 Gene3D Transferase(Phosphotransferase) domain 1 390 472 - -
Car07g01507 603 ProSitePatterns Tyrosine protein kinases specific active-site signature. 440 452 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01507 Car-Chr7 14757960 14760323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01507 44 571 Receptor kinase-like Gene Family AT2G23770 28.109 5.44e-60 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Car07g01507 PK_Tyr_Ser-Thr 3.5e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01507 - - vra:106777834 668.692