Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01504 ATGGGAATAGCAACACAAACACCGTCCCTGAATAATAATTCTTCAAATCTCTCAAATTCAAAAAATCACCAATTTCATTCCTTTTATTCAAATTCTCAAAACTCCAACAATTCTATGTCCCAAGATTACCACAACCACCATCACAACCACATCGCTTTCTCAAACGGTTTCGAGAGATCCACCACAATTGAAAACCAAAATCAAAGAGATAAAGTGAGAGTCCACGGCGGCTTCGGCTcacaacaacaaccaccaccaccaccacTGATCGGCATAGACGAAGAACCAGGCGGTCTTCCGGTTTACGAAACAACCGGAATGTTATCAGAGATGTTCAATTTCCCCCACAGCGCATCTTCTGCGGCCGAATTACTAGagcagcagcaacagcaacagcaacagcaacaAATGACATCAACGACGTCGTTTCGTTCCTCAACAAGAACACCACCCCAGCATGGAATAGCTAGTTCCAGTGACTGGTATGGTAACAGACAAACAATTTTAACAGATTCAAAAAatcatcctcatcatcatcaGATGTCAAATATAAATGCTGACTCAGCAGCTGCCATGCAACTTTTTCTCATGAACCCGCAAACCACCAGATCCCCTTCACCTCCTCAACCACCATCAACCAATTCCTCTTCAACTCTCCATATGTTACTTCCCAATCCTTCAACTTCAAATCTTCAAGGTTTTACTTCTGGAACGGGAGGCTCTTTTGGTCAATTCACATGGGTTCCTGGTACAACTCACCACCACCACCAAATCAACAACAATCCAGTTGAGATTTCAAGTGTTGTTGAAGGACAAGGTCTTTCTTTGTCTCTCTCTTCTTCCTTGCAACAACAGCAACACCATTCGGAGGAATTAAGAATGGGTGATGCTGCTGGTTTTTTATATTACAATCAAGGTGGAGGAGCTTCTTACAAGAATCTTGGTGGATTAGGAACGATTAACCAACATGGACATGTTGGATTTGGttcttcatcttcttcttcttcttcttTAGGTGTTGTTAATGTTTTGAGGAATTCAAAGTATGTTAAAGCTGCTCAAGAATTGTTGGAAGAGTTTTGTAGTGTTGGAAGGGGTCAATTCAAGAAGAATAACAACTTTGCAAGGCAACTTTCAAACCCTAATTCAAATCATGGTGGTAGTGTTGGTGGCGGTGCTTCTTCGTCTTCATCAAAAGATGTTTCACCTTTGTCACCTGCTGATAGGATTGAGCATCAAAGAAGGAAGGTCAAACTTCTTACAATGCTTGACGAGGCATCACTAGCTCAGAAAGCAATGTCACGCCATTTTCGTTGTCTAAAGGATGCAATAACAGCACAATTGAAACATAGTTGTGAGTTATTGGGAGAGAAAGATGGTGTGGGGACCTCAGGTTTGACCAAAGGTGAGACACCAAGACTTAAAATTCTTGAACAAAGCTTAAGACAACAAAGAGCGTTTCATCAAATGGGTATGATGGAACAAGAAGCTTGGAGACCACAGAGAGGATTGCCTGAACGATCTGTCAACATTTTGAGAGCCTGGCTTTTTGAACATTTTCTTCACCCGTACCCTAGTGATGCAGATAAGCAACTCTTAGCACGACAGACTGGCCTTTCCAGAAATCAGGTATCAAACTGGTTCATTAATGCCAGGGTTCGTTTGTGGAAACCCATGGTAGAAGATATGTACCAAGAAGAACTTAAAGAAGCAGAAGGATCAGATACAGAAGAAGATAATAATAATAATAATAAAGAAAAGAATCAAAACAGTAGCAACAACACTAGTGGTCACAACAACATTGCTACGACAATTGCACAAACTCCAACACCTTCTTCAACAACAACATCAAAGAGATCCAATATCAATGCAAATGAAAACGACGT 1886 0.3871 MGIATQTPSLNNNSSNLSNSKNHQFHSFYSNSQNSNNSMSQDYHNHHHNHIAFSNGFERSTTIENQNQRDKVRVHGGFGSQQQPPPPPLIGIDEEPGGLPVYETTGMLSEMFNFPHSASSAAELLEQQQQQQQQQQMTSTTSFRSSTRTPPQHGIASSSDWYGNRQTILTDSKNHPHHHQMSNINADSAAAMQLFLMNPQTTRSPSPPQPPSTNSSSTLHMLLPNPSTSNLQGFTSGTGGSFGQFTWVPGTTHHHHQINNNPVEISSVVEGQGLSLSLSSSLQQQQHHSEELRMGDAAGFLYYNQGGGASYKNLGGLGTINQHGHVGFGSSSSSSSSLGVVNVLRNSKYVKAAQELLEEFCSVGRGQFKKNNNFARQLSNPNSNHGGSVGGGASSSSSKDVSPLSPADRIEHQRRKVKLLTMLDEASLAQKAMSRHFRCLKDAITAQLKHSCELLGEKDGVGTSGLTKGETPRLKILEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKQLLARQTGLSRNQVSNWFINARVRLWKPMVEDMYQEELKEAEGSDTEEDNNNNNKEKNQNSSNNTSGHNNIATTIAQTPTPSSTTTSKRSNINANEND 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01504 628 CDD homeodomain 498 559 IPR001356 GO:0003677
Car07g01504 628 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 2 427 628 - -
Car07g01504 628 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 92 425 - -
Car07g01504 628 SMART HOX_1 498 562 IPR001356 GO:0003677
Car07g01504 628 Pfam Associated with HOX 343 425 IPR006563 -
Car07g01504 628 MobiDBLite consensus disorder prediction 1 42 - -
Car07g01504 628 Pfam Homeobox KN domain 515 554 IPR008422 GO:0003677|GO:0006355
Car07g01504 628 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 2 92 425 - -
Car07g01504 628 MobiDBLite consensus disorder prediction 374 403 - -
Car07g01504 628 MobiDBLite consensus disorder prediction 568 584 - -
Car07g01504 628 ProSiteProfiles 'Homeobox' domain profile. 495 558 IPR001356 GO:0003677
Car07g01504 628 MobiDBLite consensus disorder prediction 121 163 - -
Car07g01504 628 MobiDBLite consensus disorder prediction 568 628 - -
Car07g01504 628 MobiDBLite consensus disorder prediction 374 410 - -
Car07g01504 628 MobiDBLite consensus disorder prediction 585 628 - -
Car07g01504 628 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 427 628 - -
Car07g01504 628 MobiDBLite consensus disorder prediction 199 222 - -
Car07g01504 628 Gene3D - 493 573 - -
Car07g01504 628 SMART prehox3 338 446 IPR006563 -
Car07g01504 628 MobiDBLite consensus disorder prediction 1 44 - -
Car07g01504 628 SUPERFAMILY Homeodomain-like 499 565 IPR009057 -
Car07g01504 628 MobiDBLite consensus disorder prediction 75 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01504 Car-Chr7 14692025 14699608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01504 338 615 Homeobox Transcription Factor Family AT2G23760 53.406 6.05e-104 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Car07g01504 POX 1.6e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01504 - - mtr:MTR_8g078480 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00551 08 4619407 4625622 Car07g01504 07 14692025 14699608 PCT