Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01502 ATGGTATTGCTTCCTTACTCTGGTGTTGAAAATGCTGAGGAATCAGATTGTTCTAATAAGCCAAATCAAGGAACAGCTTATGCATACTCTGGAGAACTTATTTGTGTTCAAAATAAGGAATACTTAGTATTTGAAGATGATAAAATGAATGAACCTGGTTTAACATCTGAGAACACTCCCTCAACTGTGGAAATGATTGAAAGTGAATCACCAAACAACAATAGAGTGTCATTTTTCAAATGGTTGGCGAAGGATGAGCCTACGGCAGTGTGGTTCAAGTGGAGAGGGGAATGGCAGGCAGGCATCAAATGTGGAAGGGCAGACTGGTCATTATCAGCTTTGAAATCAAAACCAAGTTCTGACCAGATGAAATATGTTCTGATTTTTTCTTTAGACACAAGGGATTTGTCTTGGGCTGATATACTTAATGTTGAATCAATTGATAAGTTTCCTCAGCCTATACCATACAAAACTCATGAGGAAGGATTGCAAATGGTAAAAGACTTGACTATTGCACGACGCTTTCAAATGCAAAAGCTAGCTGTCGACATGCTGAGCATTGTTGATCAGTTTCATTCTAATGCTTTGGTCGAAACAGCTCGCGATGTGATGGTTTGGAAGCAGTTTGCTATGGAGGCTTCTCATTGTCATGGTTATTCAGATCTTGGAAGAATGCTTCAAAGCCTGCAAAATAGCATATTGCAGAACTACATAAAGGCTGATTGGATACTGTATTCGTATAAGTCTTGGGCTGAACGATGCAAGAATGCAAATAGTGCTATATTAGTAGAGCTGCTGAAGGAGGAATTGTATGTTTCAATTTTGTGGAATGATGTCAACAATCTCTGGGATGCTGCACTGGCACAACCAAAATTAGGTTCTGAGTGGAAAGCATGGAAGAATGATGTAATGAAATGGTTTTCCATATTTCCATCCTTTTCTAGGAACAAGGACATGATGCAGCAGGATGCTTCTAATGGTTTGCACCAAGTAAGCCTTCAGGTTTGCCGAAAAAGGCCTAAACTCACAGTTCGTCGTGCAGATACACTTCCTTCAATGGTTGACTCATTGAGTGCATTAGCAGCTGTTAATTCTGAACTGGAAGATATTGTGGAGGTACCTGTGTTAACTGATATACCTGGTAATTTGAACACTCATTGGAAGGAAATCGTAGTTGAGCCGACATATTCTGAGATCATGCTAAGCAATGGAACAGAATCAAGGCCTATGGAGGAAATTCCTGTTCAAAATGTTGTAGAATCTGGTACCGAGAATCAACAATGTCAAGCACATATCGAAGTGACGGGAAGGCCGGACGTGAGACCGGTTGTTGGTGGTGATGAAATGGCTGTTCCAAAATTTGTAGAATCTGGTAATAAGAATGCACAATGTCAAGCGTATATCGAAGCCAAGGGAAGACAGTGCGTAAGACCTGTAGTTGGTGGTGATATATACTGTTGTGTGCATTTCTCGGAGCGGGTTTTAGGCGGTTCGAGAAAAACTGAAAGACCTGTTACAATTGTTACTCCAATATGTAGTGGTACAACTATTGCCGGTACTAGATGTAAGCATCATTCACTTCCCGGTTTCTTGTTCTGTAAGAAACACCAAAACGAGACCTCAAATTCAAGCCATAATACACTGAAGAGGAAAATTGATGAAAGTTGCAGTGGTTCAAATGGTTTGATCTGCAAAGACAATGTGTTGGTAAATGATGGAAGTCCATTGCAAATTGATTCGGTGTCCGACGATGATGATTCTTTCTCCGGAAGAAACAACTTAGGTGAGTTGCTCATGCTGTCTGGAAATGATTATCATGTAATGGAGGCTCTTCAATGTATAGGCTCTCCTCACTATGGTAATGGTAATGAAGATTCTTGTTTTGAAGCACCAAAATGGTATTCCTTATACTGCGAAAAGCACTTACCAAACTGGCTTAAGAATGCAACAAATGGGAAGAGTAGGATAATATCAAATGAAGTGTTCACTGATAACTTAACTGGCTGTTCCTCTCTGGAGCAAAAGGTGCATCTGCATAAAGCGTGCATGATTTTTTACAAACTATTCAGAAGCATTTTGTCACAAAAAAACCTCGAATCTAACGAAGCTCGATTCCAATGGGCTTTGGCTGAAGCCTCAAAAGAGACTAGTGTTGGAGACTTTTTTTATAAGTTGGTTCATAGTGAAAAGGAGAGGATTAAATTGACTTGGGGATTCGATGGCGACGTGAATGCAACCTCGCTCATGGAAGGACTATCTCGCCTTCGTTCGGCCTCAATGAATGATAATGCGATCAAGTGTAAGATCTGCTTTGCAGAATTTTCTGATGATCAAACACTTTGTAACCATTGGATGGAAAATCATAAAAAGGAAGCAGAGTGGCTATTCAGAGGTTATGCTTGTGCAATTTGTTTGGATTCCTTTGCCAACAAGAAACTACTGGAATCACATGTTAAGGAAAGACACCGTGTCGAGTTTGTTGAACAATGCTTGCTTTTCCTATGTATTCCTTGTGGTGGTCATTTTGGAAATATGGAGGAATTATTGTTGCATGTTGTGTCAGCCCATCCTGTTGAATTTAAGCCATCGAAAGCTCATCCTAGTCCCGAGCGGCAAACTTTGTCTACCAGTGATGATTCTCTCGAACTCATTGAGCAGGGAAATGAAGCTCCTTTGGACAATAACAATTCTGAGAATCAGGACAGTTTGCGGAAGTTTTGCTGCAGGTTTTGTGGGATGAAATTTAATTTACTACCTGATCTCGGTCGCCATCATCAAGCTACTCATATGGATCGCAATTTAGCTAGCAGGCGCTTGGCAAGGAGAGAAGTCCGTCATTATGCTCACCGATTGAAATCGGGCCGAATCAGCCATCCTAAATTTAAAAAAGGTTTGTCAGAAGCATCATATAGGGGGATCAGGAATAGGGCTAATGCGAATTTGAAGAGAAAAAATAAGGAAACAAGGTTACTTGAGGTAGGGGAAACATCCACGCAGCCTCATGTAAACGAGACAGAAAATATCGGTCACCCAGAAGACTGTAAATACTCACTAATTGTAAAGATTTTGCTTTCTGAGATTCATAAGATTAAACCTCGGCCGAACAATATTGATATTTTATCAATTGCTCGCTCTTCATGCTGCAAAGTCAATCTTAAAGCCTCACTAGAGGAAAATTTTGGAACATTCCCTGAAAGTTTCTATGCGAGGGCTGCAAAACTTTGCAGTGAGAATGGTATTCAAGTGAATTGGCATCAGAAAGAGTTTATTTGTCTAAGAGGTTGTAATGCATCGAACGATGAAAATCTGATCCCTCGGTTAGCATTACCTTCTAATGACCAGATGATGCAAAATTCTGTAAATATATCGGATATTGCAATCAATGAGTTGGAGAAAAACGAGTTTCACTGCATCGTAAATATGCACACTTTAAAATTTGGTTCACTGCAAAATGATATAGTATTATGCGATGACATAAGCTTTGGGAAGGAATCAACTCCAGTAATTTGTGTATTAGATCAAGAAATTCTTAATTCTCTTTTTGAGCAAGATGTAAGTCTTTCTATGCCTTGGGAGAGCTTCACCTATGTTACGAAACCGATGCTTGATCGATCACTCACTCTTTATTCTCAGAGTCTGCATCTGAGATGCTCTTGCTCATCTTCGACCTGCTGTCATGAAACGTGTGATCACATATATCTTTTTGATAATGATTATGATGATGCAAAAGACATATTCGGGAAACCGATGCGTGGAAGGTTCCCATACAATGAAAATGGTCGAATCATATTGGAGGAAGGTTATCTTGTGTACGAATGTAACCACATGTGCAAATGCGATAAAACCTGTCCAAACCGAATATTGCAGAATGGAGTTCAGGTTAAATTGGAAGTCTTTAAAACAGAGAAAAAGGGATGGGCTGTAAGGGCTGGCGAGGCTATTCCGCACGGCACATTTGTGTGCGAGTTCATTGGAGAAGTTATAGGAGAGCAAGAGGCACTGAAAAGATGCGAAAGATATGGAAAAGAACATTGCAGTTATTTGTATGACATTGATGCTCATGTTAATGATATCGGTAGATTGATCGGAGAACAAGCTCGATATGTCATCGATTCTACTACATATGGAAATGTGTCTAGGTTCATCAATAACAGCTGTTCACCCAATCTTGTCAATTACCAAGTTCTTGTAGAGAGCATGGATTGTGAGCGCTCACATATCGGTCTTTATGCGAGTCGAGATATTGCTTTGGGTGAAGAGTTGACATACAATTATCACTATGAGCTTGTACCCGGAGAAGGATCGCCTTGTCTTTGTGGATCTTCGAAGTGTCGCGGACGCCTGTACTAG 4350 0.4023 MVLLPYSGVENAEESDCSNKPNQGTAYAYSGELICVQNKEYLVFEDDKMNEPGLTSENTPSTVEMIESESPNNNRVSFFKWLAKDEPTAVWFKWRGEWQAGIKCGRADWSLSALKSKPSSDQMKYVLIFSLDTRDLSWADILNVESIDKFPQPIPYKTHEEGLQMVKDLTIARRFQMQKLAVDMLSIVDQFHSNALVETARDVMVWKQFAMEASHCHGYSDLGRMLQSLQNSILQNYIKADWILYSYKSWAERCKNANSAILVELLKEELYVSILWNDVNNLWDAALAQPKLGSEWKAWKNDVMKWFSIFPSFSRNKDMMQQDASNGLHQVSLQVCRKRPKLTVRRADTLPSMVDSLSALAAVNSELEDIVEVPVLTDIPGNLNTHWKEIVVEPTYSEIMLSNGTESRPMEEIPVQNVVESGTENQQCQAHIEVTGRPDVRPVVGGDEMAVPKFVESGNKNAQCQAYIEAKGRQCVRPVVGGDIYCCVHFSERVLGGSRKTERPVTIVTPICSGTTIAGTRCKHHSLPGFLFCKKHQNETSNSSHNTLKRKIDESCSGSNGLICKDNVLVNDGSPLQIDSVSDDDDSFSGRNNLGELLMLSGNDYHVMEALQCIGSPHYGNGNEDSCFEAPKWYSLYCEKHLPNWLKNATNGKSRIISNEVFTDNLTGCSSLEQKVHLHKACMIFYKLFRSILSQKNLESNEARFQWALAEASKETSVGDFFYKLVHSEKERIKLTWGFDGDVNATSLMEGLSRLRSASMNDNAIKCKICFAEFSDDQTLCNHWMENHKKEAEWLFRGYACAICLDSFANKKLLESHVKERHRVEFVEQCLLFLCIPCGGHFGNMEELLLHVVSAHPVEFKPSKAHPSPERQTLSTSDDSLELIEQGNEAPLDNNNSENQDSLRKFCCRFCGMKFNLLPDLGRHHQATHMDRNLASRRLARREVRHYAHRLKSGRISHPKFKKGLSEASYRGIRNRANANLKRKNKETRLLEVGETSTQPHVNETENIGHPEDCKYSLIVKILLSEIHKIKPRPNNIDILSIARSSCCKVNLKASLEENFGTFPESFYARAAKLCSENGIQVNWHQKEFICLRGCNASNDENLIPRLALPSNDQMMQNSVNISDIAINELEKNEFHCIVNMHTLKFGSLQNDIVLCDDISFGKESTPVICVLDQEILNSLFEQDVSLSMPWESFTYVTKPMLDRSLTLYSQSLHLRCSCSSSTCCHETCDHIYLFDNDYDDAKDIFGKPMRGRFPYNENGRIILEEGYLVYECNHMCKCDKTCPNRILQNGVQVKLEVFKTEKKGWAVRAGEAIPHGTFVCEFIGEVIGEQEALKRCERYGKEHCSYLYDIDAHVNDIGRLIGEQARYVIDSTTYGNVSRFINNSCSPNLVNYQVLVESMDCERSHIGLYASRDIALGEELTYNYHYELVPGEGSPCLCGSSKCRGRLY 1449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01502 1449 Pfam SET domain 1305 1425 IPR001214 GO:0005515
Car07g01502 1449 ProSiteProfiles Zinc finger C2H2 type domain profile. 906 934 IPR013087 -
Car07g01502 1449 SMART set_7 1294 1432 IPR001214 GO:0005515
Car07g01502 1449 ProSitePatterns Zinc finger C2H2 type domain signature. 767 788 IPR013087 -
Car07g01502 1449 ProSiteProfiles Zinc finger C2H2 type domain profile. 799 827 IPR013087 -
Car07g01502 1449 ProSitePatterns Zinc finger C2H2 type domain signature. 835 856 IPR013087 -
Car07g01502 1449 ProSitePatterns Zinc finger C2H2 type domain signature. 801 822 IPR013087 -
Car07g01502 1449 SMART c2h2final6 833 856 IPR013087 -
Car07g01502 1449 SMART c2h2final6 765 788 IPR013087 -
Car07g01502 1449 SMART c2h2final6 799 822 IPR013087 -
Car07g01502 1449 SMART c2h2final6 906 929 IPR013087 -
Car07g01502 1449 SMART preset_2 1156 1278 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Car07g01502 1449 SUPERFAMILY SET domain 1148 1439 IPR046341 -
Car07g01502 1449 Pfam Zinc finger C2H2-type, 3 repeats 801 930 IPR040689 -
Car07g01502 1449 ProSiteProfiles Post-SET domain profile. 1433 1449 IPR003616 -
Car07g01502 1449 Pfam Pre-SET motif 1159 1286 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Car07g01502 1449 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 448 1449 - -
Car07g01502 1449 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 45 447 - -
Car07g01502 1449 Gene3D Classic Zinc Finger 750 827 - -
Car07g01502 1449 ProSiteProfiles Pre-SET domain profile. 1215 1291 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Car07g01502 1449 Gene3D SET domain 1148 1449 IPR046341 -
Car07g01502 1449 ProSiteProfiles SET domain profile. 1294 1426 IPR001214 GO:0005515
Car07g01502 1449 ProSitePatterns Zinc finger C2H2 type domain signature. 907 929 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01502 Car-Chr7 14635382 14643533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01502 80 1448 C2H2 Transcription Factor Family AT2G23740 45.747 0.0 1159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Car07g01502 zf-C2H2_3rep 1.8e-55 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01502 - - gmx:100808203 1751.1