LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Car07g01484	ATGCACATTCTATTTCGTTTCCCTGCCGTCACCCGCCGCAACTACCTGCTATTCCGGCAGTACAAGGCGGCGAAGAAAGCACCGTTACCTGCAGCAACCCCTCCAAAAGCTCCAAAGAAGCCTCAGAAGTTCAGCTTCCATGGAGTGACATGGGAGGATCCTTACAGCTGGATGTCGAACCTGAGCGATAAAGTAGCGATGCGTCACATGGACGTGTACATGGAGCAAGAGGAGAAGTACACCGAGGCCGTAATGTCTGATTCTGAACGTCTCCTCAACAAGCTTCACTTCGAAATGGCATCCCGAGTTCCTTTTGACCTTTCCACTCCTCCTCTTCGCTGGGGGCCTTGGTTGTATTATCGTCGTGTTGAAGAAGGGAAACCTTACCCTGTGCTTTGCAGAAGATTGGCAAGCTTGAACGACAGTTTCATTTCGCATAAGTATCCTCCTGCTGGCTTTGATTTTACGACAGGGAAGACAATTGAACAGAAGTTGGTTGACTATAATCAAGAGGCAGAGAGATTTGGAGGTTATGCTTATGAGGAACTTTCTGAGGTTTCACCAAACCATCAGTTTCTTGCCTATACTATGTATGATAAAGACAATGACTACTTCAAATTATCTGTGAGAAATTTGAATTCGGGTTCATTATGCAGTAAACCTCAGGCAGATCGAGTTTCAAATTTAGCATGGGCTAAAGATGGCCAGGCACTGCTTTATGTTGTAACAGATCAGAAAATGAGGCCATACCGGATTTATTACAGTCTTATAGGATCAACTGATGAAGATGTTTTACTTTTGGAAGAATCAGATGAAAATGTTCACATTGGTATAAGGCACACAAAAGACTTTAAGTTTGTGACTGTGAATACATTCTCCACCACATCATCAAAGGTCTTTCTAATAAATGCAGCTGATCCATTATCTGGCTTGAAACTTGTCTGGGAGTGTGATGCTATAGCTCACTGCATAATTGAACATCACCGAGGTTATCTCTATTTATTTACCGATGCTCCCAAAGGTGGGAAATCTGTTGATTATCATTATCTTCTTTGTAGCCCAGAGGACACTGATTCAAATCCAAGAAAATGGGAGGAGGTACTTATTGATGACCCGGATTTGGTTATTGAGGATGTTGATTTTAGTGATAAATACTTAGCACTCATTGTCAGGGAAAATCAAAACTTTAAACTTTGTTCAATTGGACTGCCACTGCTCTTCGGGAAGGGGGCAGTTAAACTGAGGAAGCTCGACCTGCAGTACTTGTCTCTTCCAAAACATGTTTGTCAAATTTCACCTGGACCAAATTATGACTTTTTCTCACCATTCATGCGCTTTATAATATCATCTCCTGTGATGCCTGATGCTGTGGTTGATTATGACCTAGCAACCAGTAAGTGGAATATCATTCAACAACAAAATATGCTTCATGACAGAACACGAATATTATATGGTACAAATTCTGCAAGTGTAAGCTTGGAATCCCCAAATGCAAAATACTCCAGTCCTGTGAATGCCAACTTGGAAGATGACCACTCATGGAATGACCTGTCTGAGTTTTATGCCTGTGAACAATATGCTGTACCTTCATTTGATGGGGTTCTGATTACATTGACTATTGTTTCTGCACGTGACAATAAGCCAAAAGATGAAAAACCTGGGATATTGCATGGTCATGGAGCTTATGGTGAGTTACTCGACAAACGGTGGCGTAGTGAATATAAAAGCCTTCTGGACCGTGGTTGGGTCATAGCCTATGCTGATGTTAGAGGTGGAGGTGGTTATGGTAAGAAATGGCATCATGATGGGAGACGAGCTAAGAAACATAATTCAATCAATGACTATATCTCCTGTGCTAAGTTCCTCATAGAAAAAAGTATTGTGCATGAAAATAAATTGGCTGCTTCGGGATATAGTGCTGGAGGACTTTTGGTTGCTGCTGCTATTAACCGTTTTCCAGATTTATTTCGTGCTGCAGTCTTGAAGGTTCCCTTTTTAGATGCAACCAACACTCTCTTGCATCCCATCTTACCACTTGCAGCTGATGATTATGAAGAGTTTGGCTACCCTAGGGACCTCGATGATTTTCTTGCGATTCGAGAATATTCTCCATATGACAATGTTCAAAGGGATGCTCTTTATCCAGCGGTATTAGTAAGCTCATCTTTCAATACACGATTTGGAGTGTGGGAAGCAGCTAAATGGGTAGCACGAGTTCGTGACCTTTCAATTTATGACCCGAAACGGCCAATATTGCTGAATCTGACCACAGATATAGTGGAGGAAAACCGTTATTTGCAATCCAAGGAATCAGCATTAGAGGCTGCTTTTCTCATTAAGATGATGGAATCCTAG	2355	0.42	MHILFRFPAVTRRNYLLFRQYKAAKKAPLPAATPPKAPKKPQKFSFHGVTWEDPYSWMSNLSDKVAMRHMDVYMEQEEKYTEAVMSDSERLLNKLHFEMASRVPFDLSTPPLRWGPWLYYRRVEEGKPYPVLCRRLASLNDSFISHKYPPAGFDFTTGKTIEQKLVDYNQEAERFGGYAYEELSEVSPNHQFLAYTMYDKDNDYFKLSVRNLNSGSLCSKPQADRVSNLAWAKDGQALLYVVTDQKMRPYRIYYSLIGSTDEDVLLLEESDENVHIGIRHTKDFKFVTVNTFSTTSSKVFLINAADPLSGLKLVWECDAIAHCIIEHHRGYLYLFTDAPKGGKSVDYHYLLCSPEDTDSNPRKWEEVLIDDPDLVIEDVDFSDKYLALIVRENQNFKLCSIGLPLLFGKGAVKLRKLDLQYLSLPKHVCQISPGPNYDFFSPFMRFIISSPVMPDAVVDYDLATSKWNIIQQQNMLHDRTRILYGTNSASVSLESPNAKYSSPVNANLEDDHSWNDLSEFYACEQYAVPSFDGVLITLTIVSARDNKPKDEKPGILHGHGAYGELLDKRWRSEYKSLLDRGWVIAYADVRGGGGYGKKWHHDGRRAKKHNSINDYISCAKFLIEKSIVHENKLAASGYSAGGLLVAAAINRFPDLFRAAVLKVPFLDATNTLLHPILPLAADDYEEFGYPRDLDDFLAIREYSPYDNVQRDALYPAVLVSSSFNTRFGVWEAAKWVARVRDLSIYDPKRPILLNLTTDIVEENRYLQSKESALEAAFLIKMMES	784

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Car07g01484	784	Pfam	Prolyl oligopeptidase family	573	740	IPR001375	GO:0006508\|GO:0008236
	Car07g01484	784	PANTHER	PROTEASE FAMILY S9A OLIGOPEPTIDASE	17	784	-	-
	Car07g01484	784	SUPERFAMILY	Peptidase/esterase 'gauge' domain	29	477	-	-
	Car07g01484	784	SUPERFAMILY	alpha/beta-Hydrolases	522	742	IPR029058	-
	Car07g01484	784	PANTHER	PROLYL OLIGOPEPTIDASE FAMILY PROTEIN	17	784	-	-
	Car07g01484	784	Gene3D	alpha/beta hydrolase	481	784	IPR029058	-
	Car07g01484	784	Pfam	Prolyl oligopeptidase, N-terminal beta-propeller domain	35	471	IPR023302	GO:0004252
	Car07g01484	784	Gene3D	-	106	474	-	-
	Car07g01484	784	PRINTS	Prolyl oligopeptidase serine protease (S9A) signature	553	571	IPR002470	GO:0004252\|GO:0006508
	Car07g01484	784	PRINTS	Prolyl oligopeptidase serine protease (S9A) signature	579	603	IPR002470	GO:0004252\|GO:0006508
	Car07g01484	784	PRINTS	Prolyl oligopeptidase serine protease (S9A) signature	607	626	IPR002470	GO:0004252\|GO:0006508
	Car07g01484	784	PRINTS	Prolyl oligopeptidase serine protease (S9A) signature	637	657	IPR002470	GO:0004252\|GO:0006508
	Car07g01484	784	PRINTS	Prolyl oligopeptidase serine protease (S9A) signature	695	710	IPR002470	GO:0004252\|GO:0006508

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Car07g01484	Car-Chr7	14276822	14282169	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Car07g01484	546	660	Carbohydrate Esterase	AT5G36210	30.508	8.48e-06	47.4

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Car07g01484	-		-	aprc:113858419	1372.07