Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01468 ATGTCAGAGAGAGAACCAAAACGGCGGCGTTTAGCTGTCTACTACTTCGTTCCATTTCACCAATTTGCAGTTGCTTCCATTCCAACCCAATCCAAATCAGCACTTATTATTTTATCTATCTATTCCATCACCAACAAACCATTTCTCAAATCAAAACGTTGCCGTTTTCCATTCCCTAACTCAAATAATCGCTCACCAAATACTACAAACAACCCTTTCTTACCTTTATTATCGGTTCGGTTTTTTGTGATGGATCGGGCCGCGATGACGGTTGGACCGGGCATGGACATGCCGATCATGCACAGTGACTGTTACGATCTAGTCGGCGATATTGGCTCCGGAAATTTCGGCGTTGCCAGCTTTTCTATCTCACTTGGCATTCGCAGCTGTCATTttcttcagGTGACAGTGCGAAGGAAAGAAATGGCTATTGATCGTCCATGTGCGGCGTGCAAGTATCTGCGTCGAAAATGCGAGGAAAACTGTGACTTAGCTCCGTACTTCCCACCGGAACACCCACAACATTTCAGTAACGTGCACGCCGTGTTCGGAAAGAGCAATGTATCGAAGCTATTGAGTGAAGTAAACGTTGAGCAGCGCCAAGAAGCTGTTAAATCATTGGTTTATGAGGCGCAAGCGCGTATGAAGGACCCCATCTATGGCTGCGTGGGTTTGGTTTCACTTCTTCAACAGAGGTTAAGGGAAATCCAAGCTGATATCGAGAGTGCCAAGAAGGAACTTGCGAATTACCTCCCTCCTGATGTTATTCAATTTGCTTTGGCCAATCCTGATGCTTTCTTTGCTCAACAAAACAACCCTAACTCTTCTCCACTAGAAAGCCAGACGATTACCCGTAATGCTCAACAGATGCCAACTCAGAATTTTATTCCTGATATTCAGCAGATGACAACCGTCCCTCCACAAAATTTCAACGGTGGATCCAGAGGAGAGTTGGTTAATTGTGACACTCAACATACCCCAATTGTTCCTTCACATAATCATTGGGAAAATTTGGGGTTTCACGACACTCAACAGACGCCAATTGTTCCTCCAAAGAATGATGGAGGAAATTTTGTAATTGGCAACACTCAACAACAACCAACTATTCCTCGGGAGAATATAATGGGTCGCAGAAGACAGATGACCATTCGTCACAATTTTCGTAGGCAAAATTATCTCAACGATAACTTTGACTATAGTATCCATGATGATTTATTTGGCGATGATGGTGATGGTGGTGGGCTAGGACACCATTTGCGGGTTCATGATCCTAGTCGTAGACATGTTCGATTACCATTTGATGGTTTTGACAATAGTAGCAGTTTCGATTACCAGAATCATCAACAACGGAAACACAACTAA 1362 0.4354 MSEREPKRRRLAVYYFVPFHQFAVASIPTQSKSALIILSIYSITNKPFLKSKRCRFPFPNSNNRSPNTTNNPFLPLLSVRFFVMDRAAMTVGPGMDMPIMHSDCYDLVGDIGSGNFGVASFSISLGIRSCHFLQVTVRRKEMAIDRPCAACKYLRRKCEENCDLAPYFPPEHPQHFSNVHAVFGKSNVSKLLSEVNVEQRQEAVKSLVYEAQARMKDPIYGCVGLVSLLQQRLREIQADIESAKKELANYLPPDVIQFALANPDAFFAQQNNPNSSPLESQTITRNAQQMPTQNFIPDIQQMTTVPPQNFNGGSRGELVNCDTQHTPIVPSHNHWENLGFHDTQQTPIVPPKNDGGNFVIGNTQQQPTIPRENIMGRRRQMTIRHNFRRQNYLNDNFDYSIHDDLFGDDGDGGGLGHHLRVHDPSRRHVRLPFDGFDNSSSFDYQNHQQRKHN 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01468 453 Coils Coil 226 246 - -
Car07g01468 453 Pfam Lateral organ boundaries (LOB) domain 147 244 IPR004883 -
Car07g01468 453 PANTHER LOB DOMAIN-CONTAINING PROTEIN 32-RELATED 144 305 - -
Car07g01468 453 ProSiteProfiles LOB domain profile. 146 247 IPR004883 -
Car07g01468 453 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 144 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01468 Car-Chr7 14108163 14110014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01468 147 256 AS2 family AT5G66870 60.909 8.33e-45 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Car07g01468 LOB 5.5e-38 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01468 07 14108163 14110014 Car08g00519 08 4415142 4419862 PCT