Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01461 ATGGGTCTCTGCACTTCAAAACCACTCTCTTCTCCCAATTCATTCAACCATTCAACTCACACTCAATCACAAACCACAACAACTATTTCCAATTCCAATGAAGAAACACAAAACCCTAAAAAAACACCTTTTTTCCCCTTTTACACTCCAAGTCCAGCTCACAATTTATTCTCCGCCAACTTCCCCAAAACTCCCGGAACTCCGAGAAGGTTCTTCAGACCACCGTCGCCGGCGAAGCATATAAGGTCACTTCTTGCCCGCCGTCACGGCTCCGTCAAGCCGAATATCGGTGCTAGCATCTCCGAAGGGAGTGAAGCTGAAACGGTTGCTCCCCTTGATAAGAATTTCGGATTCTCGAAGCATTTTGGTAACAAGTATGAAGTTGGTGAAGAAGTTGGTAGAGGACACTTTGGTTACACTTGTTCTGCCATTGCTAAGTTTAATAACAAGGGTGATCTTAAGGGTCATCGTGTTGCTGTTAAGATGACTACTGCTATTGCAATTGAGGATGTGAGAAGGGAAGTGAAAATTTTGAGAGCTTTGAATGGACATAAAAATTTAATTAAATTTTATGAGGCTTATGAAGACCATGATAATGTCTATATAGTCATGGAGTTGTGTGAAGGAGGGGAACTTTTGGATAGAATACTATCAAGAGGTGGGAAATACTCAGAGGAAGATGCAAAAGCTGTAATGTTGCAGATACTGAATGTTGTTTCATTTTGCCATCTACAAGGCGTTGTTCACCGTGATCTTAAACCTGAGAACTTCTTGTTTTCATCCAAAGACGAGAACGCAGAGCTGAAGGCCATAGACTTTGGTTTGTCGGATTTTGTTAAATCGGATGAACGGCTTAATGATATCGTTGGTAGCGCATACTATGTGGCTCCAGAGGTTCTGCATAGAGCTTACAATACAGAGGCTGACGTTTGGAGTATTGGTGTGATTGCATATATTTTATTATGCGGCAGTCGTCCATTTTGGGCTCGGACTGAATCTGGGATCTTTCGTTCCGTATTGAAAGCGGATCCAAGCTTTGATGAACCTCCTTGGCCTTCTTTGTCAGACGAGGCAAAAGATTTTGTTAAGCGATTACTTAATAAAGATCCTAGGAAGAGAATGACTGCAGCGCAGGCATTAGGTCATCCGTGGATAAAGAGTTATAAGGATGTAAAAGTACCCCTGGATATTCTGGTGTTCAAGCTCATGAAAACATACATGCGTTCCTCCTCCCTACGAAAATCAGCTTTAAAGGCTCTGTCGAAGACGTTAGCTACTGACGAGCTGAATTATTTGAAGGAGCAGTTTACACTTTTAGAACCAAATAAAAATGGCACCATTAGCTTGGAAAATATCAAAACGGCGTTAATGAGGAATGCAACAGATGCTATGAAGGAGTCACGCATGCCTGATCTTCTGGCATCACTTAATGCATTGCAATATAGAAGGATGGACTGTGATGAGTTCTGTGCAGCTGCACTCAGTGTTCATCAACTTGAAGCACTTGACCGGTGGGAGCAACATGCGCGCTGTGCCTACGAACTTTTCGAAAAGGATGGAAACAGAGCTATAGTCATTGAGGAACTAGCTACGGAGCTTGGCCTTGGTCCATCGGTACCTGTGCATGCTGTTCTTCACGACTGGATTAGGCACACTGATGGAAAGTTAAGCTTCCTTGGGTTTGTTAAGTTGCTGCATGGTCCATCTCGAAGTCTTGTAAAACCTCAGTAA 1731 0.4292 MGLCTSKPLSSPNSFNHSTHTQSQTTTTISNSNEETQNPKKTPFFPFYTPSPAHNLFSANFPKTPGTPRRFFRPPSPAKHIRSLLARRHGSVKPNIGASISEGSEAETVAPLDKNFGFSKHFGNKYEVGEEVGRGHFGYTCSAIAKFNNKGDLKGHRVAVKMTTAIAIEDVRREVKILRALNGHKNLIKFYEAYEDHDNVYIVMELCEGGELLDRILSRGGKYSEEDAKAVMLQILNVVSFCHLQGVVHRDLKPENFLFSSKDENAELKAIDFGLSDFVKSDERLNDIVGSAYYVAPEVLHRAYNTEADVWSIGVIAYILLCGSRPFWARTESGIFRSVLKADPSFDEPPWPSLSDEAKDFVKRLLNKDPRKRMTAAQALGHPWIKSYKDVKVPLDILVFKLMKTYMRSSSLRKSALKALSKTLATDELNYLKEQFTLLEPNKNGTISLENIKTALMRNATDAMKESRMPDLLASLNALQYRRMDCDEFCAAALSVHQLEALDRWEQHARCAYELFEKDGNRAIVIEELATELGLGPSVPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLVKPQ 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01461 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Car07g01461 576 Pfam Protein kinase domain 126 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01461 576 SUPERFAMILY Protein kinase-like (PK-like) 120 411 IPR011009 -
Car07g01461 576 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 30 571 - -
Car07g01461 576 Gene3D Phosphorylase Kinase; domain 1 119 211 - -
Car07g01461 576 Gene3D - 403 494 - -
Car07g01461 576 Gene3D - 410 564 - -
Car07g01461 576 SMART serkin_6 126 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01461 576 ProSitePatterns Protein kinases ATP-binding region signature. 132 161 IPR017441 GO:0005524
Car07g01461 576 Gene3D Transferase(Phosphotransferase) domain 1 212 399 - -
Car07g01461 576 MobiDBLite consensus disorder prediction 1 43 - -
Car07g01461 576 ProSiteProfiles Protein kinase domain profile. 126 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01461 576 SUPERFAMILY EF-hand 414 567 IPR011992 -
Car07g01461 576 PANTHER SERINE/THREONINE-PROTEIN KINASE 30 571 - -
Car07g01461 576 CDD STKc_CAMK 125 384 - -
Car07g01461 576 ProSiteProfiles EF-hand calcium-binding domain profile. 427 462 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01461 Car-Chr7 14042474 14046591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01461 1 574 EF-hand Containing Proteins AT3G50530 69.219 0.0 875
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Car07g01461 Pkinase 1.5e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01461 K00924 - gmx:100803313 902.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01461 07 14042474 14046591 Car08g00515 08 4363258 4367152 PCT