Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01447 ATGTCGAAAATGGTGGCGGTCGATGAAAAGAAGAGAGATGGAATGGTTCAACAAAATGATCAAGTGACTTTGGCATTTCATGGGGGAGATGTGTATGATGGAGTTCCTCTTGCACATTGCTCTAAAAAGTCTCCTTTGGATGATAAACAGAACAAGGTAGTGGATAATAAATGCAAGCTCTTGAAAAATCCAACAAAACAAGCAACACCAGATGAGTCACAATCACAAAAGTTTGCAAGCTCAATGAAAGTGACAACAGACGGAACATTTTCTCGTGGCGAGGCCATATCATCTGCTGTGATTCAAGCGGAAGGTCTCCGATCACATTTGGGATCGGAATTCCCTAGTTTTGTGAAGTCCTTGGTTAGATCACATGTAGCTAGTTGTTTCTGGATGGGGCTTCCTGTGGCGTATTGTAAAAGGAACTTACCGGATAAGGATACAACTATAACTTTAGAAGATGAATCTGGTAGAGAATACAAAACTAAATACATTGCTTGTAAGACAGGATTGAGTGCTGGTTGGAGACAGTTTTCTGCTGTCCATAAATTGCTTGAGGGTGATGTTGTGGTGTTCCAATTAGTTGAACCTACCAAATTTAAGGTTTATATTATAAGAGCAAGTAATAATTTAAAGGAACTAGAAGGGATCATTTTGAATCCAGACAGTTGCACAAAACAAAAAGTGGGAGGCAGAAATAACATAGATTCTGATGCTGTAGCATGTAATAGTCCCAAAAGAAAAAATGGTAAACAAGTTCCACAAGACATCCAAAAGAAAAAGAGGACAACTATATCAAAAATGGAGGCTAAAGCTAAAAAGTCTATAGAAAATTCTGAAAATGATAGTGAAGATGCTTTCTCAGAAATATTTGAAGGATTTAAAATGCCTGAATTCAAAGACTTGAAAGGTTTTGAAAGTTTCAACATCATAGTTGATGGAATGCAAATTGATGACGAATTCTCTACCGAAGTTCGAAACAAGTACTACAAACTATGCTATAGTCAACAAGCTTATCTTCACGAAAATCTGATCAAAGGCTTAAACTATAAGCTTGTTTCTGGAATTATATGTGAAACTGTCCACATTGCTGATGCTATCAAAGTCAGTGTTATATCGACCCCACGTGTCGAATTTTCTAGTTGGGATAAAACTTTGCTAGCCTTTGAGCATTTGGGTATGAATGTTCAGTTTTTAAGAGTTCGGTTGCGCAGGCTTGTAAGCATTGCTTATGAAAATGTTGACGCCGAAGAGACTAGAAGATATTTGGCTTATCGAACCGAGCGCAGTCGAGCAGACGATGAAATAAACAATGTGGAAATGAAGCTTGAAGAATTGAAGGAAGCTTGTTATGGATTTAGTGCTTATCTTGAGAGTTTGAAGTTCAAAGCTGAAAACTATCAACACAAGTTTCATAAAGAAGTTGCTGCTAATTGGTGA 1440 0.375 MSKMVAVDEKKRDGMVQQNDQVTLAFHGGDVYDGVPLAHCSKKSPLDDKQNKVVDNKCKLLKNPTKQATPDESQSQKFASSMKVTTDGTFSRGEAISSAVIQAEGLRSHLGSEFPSFVKSLVRSHVASCFWMGLPVAYCKRNLPDKDTTITLEDESGREYKTKYIACKTGLSAGWRQFSAVHKLLEGDVVVFQLVEPTKFKVYIIRASNNLKELEGIILNPDSCTKQKVGGRNNIDSDAVACNSPKRKNGKQVPQDIQKKKRTTISKMEAKAKKSIENSENDSEDAFSEIFEGFKMPEFKDLKGFESFNIIVDGMQIDDEFSTEVRNKYYKLCYSQQAYLHENLIKGLNYKLVSGIICETVHIADAIKVSVISTPRVEFSSWDKTLLAFEHLGMNVQFLRVRLRRLVSIAYENVDAEETRRYLAYRTERSRADDEINNVEMKLEELKEACYGFSAYLESLKFKAENYQHKFHKEVAANW 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01447 479 Coils Coil 429 449 - -
Car07g01447 479 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 16 416 IPR044837 -
Car07g01447 479 SMART B3_2 117 208 IPR003340 GO:0003677
Car07g01447 479 CDD B3_DNA 115 206 IPR003340 GO:0003677
Car07g01447 479 MobiDBLite consensus disorder prediction 244 280 - -
Car07g01447 479 Gene3D - 98 210 IPR015300 -
Car07g01447 479 ProSiteProfiles B3 DNA-binding domain profile. 117 208 IPR003340 GO:0003677
Car07g01447 479 Pfam B3 DNA binding domain 117 207 IPR003340 GO:0003677
Car07g01447 479 MobiDBLite consensus disorder prediction 252 280 - -
Car07g01447 479 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS01G0234100-LIKE 16 416 - -
Car07g01447 479 SUPERFAMILY DNA-binding pseudobarrel domain 110 208 IPR015300 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01447 92 209 B3 DNA Binding Superfamily AT5G42700 51.695 9.63e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Car07g01447 B3 2.5e-16 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01447 07 13797292 13800444 Car07g01447 07 13797292 13800444 ECH