Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01444 ATGGCACTTCCCATTTCGAATGATATTGTTGGAAAATTATTACCAAATAAGGAACAAGAAAATTCTATCATAGTATCCACTCTTATTAAGGTTGTCTCTTCTAGTGTTGTTGTTCATAATTCTGATATTCAGCTACTTAATAACAACAACATTAACCAACAACAAAGGATTTCGACTTATGCAAGTGGGTCCCTCCAGAACCAACATGATACTGCCACGTGTCTATCATGCAAAATCAAAGGCTGTCTAGGTTGCATTTTCTTCATTGAGAAGGAGAAAAAGGAAGAGAAGAGGAAATACAGGGGAGTGAGGCAGAGAGCATGGGGAAAATGGGTGGCTGAGATTAGAGACCCAAAAAGGGCAACTCGTGTTTGGCTTGGTACTTTTCAAACGGCTGAGAAAGCTGCAAGGGCTTATGATAAAGCTGCTATTCAGTTTCATGGTGTTAGAGCTAAGATTAATTTTGATTTCTCTGATTATGAAGTGGGCCATGTTGGTGATGTTGTAGCAGGGATGAAAAAAACAAAAACTACCATCTTATCTTTTGGATCCAAAAGTGAACTAGCCTAG 570 0.3877 MALPISNDIVGKLLPNKEQENSIIVSTLIKVVSSSVVVHNSDIQLLNNNNINQQQRISTYASGSLQNQHDTATCLSCKIKGCLGCIFFIEKEKKEEKRKYRGVRQRAWGKWVAEIRDPKRATRVWLGTFQTAEKAARAYDKAAIQFHGVRAKINFDFSDYEVGHVGDVVAGMKKTKTTILSFGSKSELA 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01444 189 Pfam AP2 domain 99 147 IPR001471 GO:0003700|GO:0006355
Car07g01444 189 SUPERFAMILY DNA-binding domain 99 157 IPR016177 GO:0003677
Car07g01444 189 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF109 16 160 - -
Car07g01444 189 CDD AP2 99 156 IPR001471 GO:0003700|GO:0006355
Car07g01444 189 Gene3D AP2/ERF domain 98 157 IPR036955 GO:0003700|GO:0006355
Car07g01444 189 PRINTS Ethylene responsive element binding protein signature 100 111 IPR001471 GO:0003700|GO:0006355
Car07g01444 189 PRINTS Ethylene responsive element binding protein signature 122 138 IPR001471 GO:0003700|GO:0006355
Car07g01444 189 ProSiteProfiles AP2/ERF domain profile. 99 156 IPR001471 GO:0003700|GO:0006355
Car07g01444 189 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 16 160 - -
Car07g01444 189 SMART rav1_2 99 162 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01444 Car-Chr7 13760556 13761125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01444 16 160 AP2-EREBP Transcription Factor Family AT4G34410 42.623 2.81e-30 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Car07g01444 AP2 2.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01444 - - cam:101497463 323.553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01444 07 13760556 13761125 Car07g01444 07 13760556 13761125 ECH