Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01438 ATGGATGTTGAAATACTTAAATCTTCAGTTGGTAGCATGGACATGATATCAATGATGATGCAAATGGAAAAGTTTCCTAATTCACAATTCAACACTGAACAACCTTTTTATAACACTGTTCCATTATTTAACCAAAATATTGCATTATCATCATCTCCACCACCATCTTTCAACATTGATCCTCTTCTTATACATTCCAATCTCAATTTCAACACTATCCAACAACAACCACTAGAACAAACTTCATTATCATTTCCTTATTCTTCTGataataataaaaatagtaataacaagaagaatTCAATGGCTACAATGAGGGAAATGATATTTAGAATGGCGGTTATGCAACCGATTCATATCGATCCGGAATCAATCAGGCCACCGAAGAGAAGGAACGTGAAGATATCGAAGGATCCGCAGAGCGTAGCGGCGAGACATAGAAGAGAAAGGATAAGTGAAAGGATAAGGATATTGCAAAGATTAGTACCTGGTGGAACAAAAATGGACACTGCTTCTATGTTGGATGAAGCTATACATTATGTGAAGTTTTTGAAGAAACAAGTACAAACGTTGGAACAAGTTGGGGCTAATAGATCAAACATGAATGGAGGGAGTAGTTTAATGAATAATTTTAATGTTAATTATTCTGGTTTTATGATGAAGGGTTGTCAACCTTTTCAAATGGTGGGTTCTGCTTCTAAACAATTGCTTAGCTAG 717 0.3445 MDVEILKSSVGSMDMISMMMQMEKFPNSQFNTEQPFYNTVPLFNQNIALSSSPPPSFNIDPLLIHSNLNFNTIQQQPLEQTSLSFPYSSDNNKNSNNKKNSMATMREMIFRMAVMQPIHIDPESIRPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQVGANRSNMNGGSSLMNNFNVNYSGFMMKGCQPFQMVGSASKQLLS 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01438 238 SMART finulus 141 190 IPR011598 GO:0046983
Car07g01438 238 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 135 184 IPR011598 GO:0046983
Car07g01438 238 Gene3D - 134 203 IPR036638 GO:0046983
Car07g01438 238 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 1 231 IPR045843 GO:0003700|GO:0006355
Car07g01438 238 Pfam Helix-loop-helix DNA-binding domain 145 184 IPR011598 GO:0046983
Car07g01438 238 PANTHER BASIC HELIX-LOOP-HELIX (BHLH)-LIKE PROTEIN 1 231 - -
Car07g01438 238 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 139 194 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01438 Car-Chr7 13679527 13680574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01438 18 205 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 58.247 1.79e-51 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Car07g01438 HLH 1.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01438 - - gmx:100800816 235.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01438 07 13679527 13680574 Car07g01438 07 13679527 13680574 ECH