Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01437 ATGGATTGGGTACGAGGAGACTCTCTTGGTAGAGGAACTTTTGCAACCGTTCATTTAGTTATACCCAAAGGAATCAATTCCTCTCAATTTCCTTCTCCGACAGCCGTCAAAACCTCCGATGTTGCAACTTCGTCTTCACTCAAAAACGAGAAACAAGTTCTCGATTGCTTAGGTTCGTGTCAACGAATCATTCGTTGTTTCGGAGACGATTACACTTTCGAGAATGGCGAAAAGTATTACAATTTGTTTCTCGAATATGCTTCCTCCGGAAACCTCTCCGATCAACTAAAATTTCACGGTGGCCGGATTCCTGAACAACACATTCGCCGTTACACGAAGTCCGTCGTTGAAGGTCTTCACCATATTCATCGGAATGGGTTTGTTCACTGTGACATAAAGCTTCAAAATATTCTAGTATTCAACGATGGGGAAGTCAAAATCGCTGATTTCGGTCTTGCGAAAAAAACAGGGGAAAAACAGAGTGAAAACAGGGGATACGAATGCAGAGGAACTCCACTGTTTATGTCGCCGGAAACAGTAAATTCCGGCGAGAATGAGTCTCCGGCGGATATTTGGGCACTTGGGTGTGCGGTGGTGGAGATGGTAACGGGAAAATCAGCGTGGAATTTGGAGAATGATTCGTGTTTGTGGTCATTGTTGCTTCGAATTGGAAAAGATCCGAGTAAAAGATGGACGGCTGAGATGCTTTTGAATCATCCTTTTGTTGAAGAAATTGTTTCAATGAAAAATGTTAATGAAGATGAATCACCAAGAACTCACTTTGATTTCAACAATTGGGTTCCTAGTGTTAATAGTTCCGTTATAAGTTCACCGGTATCGGATGAGTTGTGTCCATGGGATATTGATTCGGTGGCGGATCGGCTCCGGCAGCTTGTGACGGTTGATGGACCGGTGAGTTGGTCGGAATCAGATGGTTGGACTAATGTTAGATGA 954 0.435 MDWVRGDSLGRGTFATVHLVIPKGINSSQFPSPTAVKTSDVATSSSLKNEKQVLDCLGSCQRIIRCFGDDYTFENGEKYYNLFLEYASSGNLSDQLKFHGGRIPEQHIRRYTKSVVEGLHHIHRNGFVHCDIKLQNILVFNDGEVKIADFGLAKKTGEKQSENRGYECRGTPLFMSPETVNSGENESPADIWALGCAVVEMVTGKSAWNLENDSCLWSLLLRIGKDPSKRWTAEMLLNHPFVEEIVSMKNVNEDESPRTHFDFNNWVPSVNSSVISSPVSDELCPWDIDSVADRLRQLVTVDGPVSWSESDGWTNVR 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01437 317 Gene3D Transferase(Phosphotransferase) domain 1 2 281 - -
Car07g01437 317 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 225 276 - -
Car07g01437 317 ProSiteProfiles Protein kinase domain profile. 3 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01437 317 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 224 - -
Car07g01437 317 SMART serkin_6 3 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01437 317 Pfam Protein kinase domain 5 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01437 317 ProSitePatterns Protein kinases ATP-binding region signature. 9 37 IPR017441 GO:0005524
Car07g01437 317 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 225 276 - -
Car07g01437 317 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Car07g01437 317 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 224 - -
Car07g01437 317 SUPERFAMILY Protein kinase-like (PK-like) 3 280 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01437 Car-Chr7 13644157 13645214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01437 1 317 MAP Kinase Kinase Kinase AT4G36950 48.997 1.22e-102 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Car07g01437 Pkinase 4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01437 - - aprc:113858661 424.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01437 07 13644157 13645214 Car07g01437 07 13644157 13645214 ECH
Car08g00490 08 4119947 4121044 Car07g01437 07 13644157 13645214 PCT