Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01434 ATGGAGACTTCTACAATTGTATTTATGATGTACACAAAGAGGGGAAGTGAGCGTGAGCAAAACAAAAGCCAACAACTTTCTTCATCCAACGCCTACAGATCTAGTAGGTTCATCAACTCTTTAGGAAACTCAACTACAATGAACCGCCAAGGGAGAAATGAGAGAATCTACAACAGAAGGGAAATCATTGATGAAAATGAAACTATCATCCCACCTATGTCAGTTGGAGCAGCACCAACACAGCACTCTTTTTCAACCTCAAGTTTGGTGAGTTCTAGAAGAGTAGGAGAAATTTCCAGCATTGCCAACAATCATTTAAGAGTGAATAATGATGATGTTTCTCTCTCTGAGTCATATGGATTTGTTGTTCCATATATGTATGATGCTCAAACTCATAGGAGACGTTGTATTGATCTACCAAATAATAATTTATACTCAAGAAATGTAAGGAACATAAATATGAATTTGTCCTCAAATACTGTAGTTGAGAGTGGAAGCGTGTCTTCAACTATGAATGCAATACATAGTAGAGAATATTCTACAGACTTTGTGTTGGATCAAGATGTTCATGTGCATTTACCATTAAAAAGAACATCCACCATGAGAGAATTTGGTGAAGGTTCAAGCTCAAGTGGTCAAGCTAGACCTACTAGAGGGGAACATATTGGTCAAAGTTTCTCACAACAACCAATGACAACTCAACATGTTCAAGGAATTAACTCCATATATGCACCAAATATGATCAATCATTATCATTTCCAAACCCTAAACAACATGTCACCTTTACTTGGAAGGGGAATCCCCTACCTTGGAAGTCTTCCAATTCATCCTCAACAAAATGTTTTTAGTTTTGGTAATATTCATCAACCAAATGCTATTGAATGGACCCCTCAAATCAATCTCCATCAACAAGAACATCATCATGGTACTCAAACAATTATGTCCCCTCTTGTTCCATCAACTACAAGTTCTATATTAGAGAATCTACAACGTTCAATCGCAACAACTCCTATGATTCAAGTTGGTGGTGGCAATGCTGAACAACAACCCCTTCTTCAACAAACTCTTGATACTGAACTGATGAGACAAATGGCTATTGAATGGGACCCTCAAGTCAATCTCCATCAACAAGAATATCATCCTAGTACTCAAACAACGTTGTCACCTCATGTTCCATTTACTACAAGCTCTATAATAGAGAATCTACAACGTTCAATCGTGACAAGTGATGATATGATTCAAGTTGGTGGAAATGTTGAACAACAACCACTCTTTAACCAAACTCTTGATCCTCAACTGATGAGAGAAGTGACACAAACTCAGGACGATGCTACGATCCTTAACGCCGAAGTTCTGTTTCAAATCTTTGAGGATATGTACCGGCAGTGGAGACAAAGTCAAAACGAACAAGGGCTTACTGAGGATGAAATAATAAACAACATTATCCATGAAAAGTTTGAGGTCACAATTGAAGGAGATTTGGAAAATAAAGAAGCGTGTTGCATTTGTCGGGACCGATTTATAAATGGAGAAGAGATTGGAAAGTTGGATTGTGGACACATTTTTCACATGGATTGCATCAAACTGTGGCTAGCGAGAAAAAATTTATGCCCCCTTTGCAAACGTAGGGGTTTAGTTTTTTATTGA 1647 0.3777 METSTIVFMMYTKRGSEREQNKSQQLSSSNAYRSSRFINSLGNSTTMNRQGRNERIYNRREIIDENETIIPPMSVGAAPTQHSFSTSSLVSSRRVGEISSIANNHLRVNNDDVSLSESYGFVVPYMYDAQTHRRRCIDLPNNNLYSRNVRNINMNLSSNTVVESGSVSSTMNAIHSREYSTDFVLDQDVHVHLPLKRTSTMREFGEGSSSSGQARPTRGEHIGQSFSQQPMTTQHVQGINSIYAPNMINHYHFQTLNNMSPLLGRGIPYLGSLPIHPQQNVFSFGNIHQPNAIEWTPQINLHQQEHHHGTQTIMSPLVPSTTSSILENLQRSIATTPMIQVGGGNAEQQPLLQQTLDTELMRQMAIEWDPQVNLHQQEYHPSTQTTLSPHVPFTTSSIIENLQRSIVTSDDMIQVGGNVEQQPLFNQTLDPQLMREVTQTQDDATILNAEVLFQIFEDMYRQWRQSQNEQGLTEDEIINNIIHEKFEVTIEGDLENKEACCICRDRFINGEEIGKLDCGHIFHMDCIKLWLARKNLCPLCKRRGLVFY 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01434 548 SMART ring_2 500 540 IPR001841 -
Car07g01434 548 ProSiteProfiles Zinc finger RING-type profile. 500 541 IPR001841 -
Car07g01434 548 MobiDBLite consensus disorder prediction 201 233 - -
Car07g01434 548 Pfam Ring finger domain 499 541 IPR001841 -
Car07g01434 548 SUPERFAMILY RING/U-box 488 543 - -
Car07g01434 548 MobiDBLite consensus disorder prediction 202 233 - -
Car07g01434 548 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 471 546 IPR045191 GO:0061630
Car07g01434 548 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 458 544 IPR013083 -
Car07g01434 548 PANTHER E3 UBIQUITIN-PROTEIN LIGASE MBR2-LIKE 471 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01434 Car-Chr7 13606400 13612005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01434 429 545 C3H Transcription Factor Family AT2G15530 33.058 2.46e-17 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01434 - K22753 lang:109350901 100.908