Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01433 ATGGCTATCAATAACGAAGGGCAACAACAAAACCAAAACCAACAACTCATCGGACACAAAGATCTTGCTCATAAGACTCTCCTTCAAAGTGATGCACTTTACCAGTATATACTCGATACCAGCGTGCATCCAAGAGAGCATCCATGTCTGAAGGAGCTACGTGAGATGACAGAAAAACACCCTCGGAACCTTATGGCTACCCCTGCTGATGAAGGACAACTTCTAAGCATGTTGATTAAGCTCATAAATGCGAAGAACACGTTGGAAATTGGTGTGTTCACTGGTTACTCTCTGCTCTCCACTGCTCTTGCTCTTCCCTCTGATGGAAAGATATTGGCTTTGGACGTGAGTCGTGAATATTATGAGCTGGGATTGCCAATAATTGAAAAAGCTGGAGTAGCTCACAAGATTGACTTTAGAGAAGGGCCTGCTCTCCCTCTTCTTGACCAACTTCTTCAAGATGAAAATAATAAGGGAATATTTGATTTTGTTTTTGTGGATGCTGACAAGGATAATTACTTAAACTATCACAAGAGGGTGATTGATCTTGTGAAAATTGGGGGATTGATCGGATACGATAACACCTTATGGAGTGGATCGGTGGTTGCACCACCTGATGCACCTCTAATGGATTACGTGAAACATTATCGTCCTCATGTGATTGCACTCAACAAGTATCTAGCTCAAGATTCAAGGATCGAGATTTGTCAGCTCCCAGTAGTTTCAACAGATCCGCAAAAGTATATCAAGGAAGCTGCACGAGAAACTTGCGGATTAGTGAACAAAATAGTTGGTAGAATCAGCAACTCGCCTCTCATAGGTGCTGGTACATATGCCAATGAATTTTGTGCCGTTTCGGCAACAGGAAAAGGCGAAGCGATAATACGTGTTACAGTAGCAAGAGATGTGGCTGCTATGATGGAATTCAAAGGCCTGTCTCTAAAAGAAGCTGCAAATTGTGTTGTACATGAGCGCACATCAAAGGGCACTGTTGGTTTGGTTGCTGTTTCTGCTTCAGGAGAAGTTGTAATGCCTTATAATACAACATGCATGTCTAGAGCGTGTGCTACTGAAGATGGATATTCTGAAGTTGCAACTTGGTTGAGAATTCAGTTTTGGGTGCTCAAGTTTGTGTTCAAGGAGGAACATATTGGGATTCTTGTATTTGAATGA 1173 0.422 MAINNEGQQQNQNQQLIGHKDLAHKTLLQSDALYQYILDTSVHPREHPCLKELREMTEKHPRNLMATPADEGQLLSMLIKLINAKNTLEIGVFTGYSLLSTALALPSDGKILALDVSREYYELGLPIIEKAGVAHKIDFREGPALPLLDQLLQDENNKGIFDFVFVDADKDNYLNYHKRVIDLVKIGGLIGYDNTLWSGSVVAPPDAPLMDYVKHYRPHVIALNKYLAQDSRIEICQLPVVSTDPQKYIKEAARETCGLVNKIVGRISNSPLIGAGTYANEFCAVSATGKGEAIIRVTVARDVAAMMEFKGLSLKEAANCVVHERTSKGTVGLVAVSASGEVVMPYNTTCMSRACATEDGYSEVATWLRIQFWVLKFVFKEEHIGILVFE 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01433 390 Pfam Asparaginase 252 367 IPR000246 GO:0016787
Car07g01433 390 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 9 241 - -
Car07g01433 390 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 30 241 IPR029063 -
Car07g01433 390 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 26 255 IPR002935 GO:0008171
Car07g01433 390 Pfam O-methyltransferase 40 240 IPR002935 GO:0008171
Car07g01433 390 Gene3D Vaccinia Virus protein VP39 16 241 IPR029063 -
Car07g01433 390 PANTHER O-METHYLTRANSFERASE-RELATED 9 241 - -
Car07g01433 390 CDD AdoMet_MTases 88 190 - -
Car07g01433 390 Gene3D (Glycosyl)asparaginase 242 369 - -
Car07g01433 390 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 252 366 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01433 Car-Chr7 13581839 13589353 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01433 4 240 Monolignol Biosynthesis Gene Families AT4G34050 72.996 7.68e-128 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01433 K00588 - gmx:100795858 387.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01433 07 13581839 13589353 Car07g01433 07 13581839 13589353 ECH