Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01426 ATGTGGGATCTTAATGGTACACCCTTTAAGAGAAAAGAAGAAGAATCTGAAGGATGTTCTTCTCTCAAAACTTCAATCAATGGTGATGATGATGATAATAAAGGAAAAAGGGTTGGATCTGTTTCAAATTCAAGTTCTTCTGCTGTTGTAATCgaagacgaatcagaagaagaattagaattggaagaagaaggtaacagaactatgaagaaaagaaacaacaagaTATTTGGATTTTCTGTGACACAAGATGATAATTTTCCTGTGACAAGACAATTTTTTCCTATGGATCAAGAAACAGATATGACTATAGCAGCATCAAGTGGTGGAACTTTATCTTCTTCTAGTTTTCCTCGTGCTCATTGGGTAGGTGTGAAATTTTGTCAATCAGAAACACTTGGTAATGGAAAATCAGTGGAAACTTCTCAGCCTATGAAAAAGAGTAGAAGAGGACCAAGGTCAAAAAGTTCACAATATAGAGGTGTTACTTTTTACAGAAGAACAGGTCGATGGGAATCTCATATATGGGATTGTGGAAAACAAGTGTATCTGGGTGGATTTGACACAGCACATGCAGCTGCTCGTGCATATGATAGAGCGGCTATTAAGTTTCGAGGAGTAGAGGCTGATATAAACTTTAACATAGAAGATTATGAAGAAGATTTGAAGCAGATGAGTAATTTGACAAAGGAAGAGTTTGTACATGTACTTCGTCGACAAAGCACTGGATTTCCAAGAGGAAGCTCTAAATATAGAGGTGTAACTTTGCATAAATGTGGAAGATGGGAGGCTCGAATGGGCCAATTTTTAGGAAAGAAATACGTTTATCTGGGCCTGTTTGACACCGAGGTTGAAGCTGCTAGAGCTTATGACAAAGCAGCAATAAAATGCAATGGTAAAGAGGCCGTGACCAATTTTGATCCGAGCATCTATGATAGTGAGCTTAATTCTGCTGAACCAGCTAGTAACGCTGCTGATCACAATTTGGATTTAAGTTTGGGAAATTCAAGTTCAAAGCCCATCAATAATACTAGAGCATTTGGGAGTCACACCACAAATGCTACAAATCATGACCAACACTTGTCATCTGAATCTAATTGGCAGAATGGGGGAAACAAGCCTAAGCTTGTGAATATACTACCAAAACCATATATTAATAGACCAAACAACACGGAAGGATATGGAAGGGATTTTCATGGAGACAGTGAAGCATTGAGAATGCTAAGTCAAACTCACCTTCATTCTTCATCCTCTAATGAAATGCAAAGATATGCTCCCTTTAGAGACTCACAAATGTTTCATAGTTTTGCACATACTCACCCACCAAATTTTCATTTTCCCAGCAGCAGCTATGTAAACCATGTTGGAAGTGAACTTTCATTATCAACAAGAAATGAACAAGAAGAATGGCAATCAAGGCCACAATATTTAACAACTGCTGCTGCAGCATCATCAGGATTCCCACCTCAAATAAGACCCTCTTCTCAAGCTTGGCTGCACAAAAATGGGTTTCACACTCTCATGAGACCCTCTTGA 1536 0.3685 MWDLNGTPFKRKEEESEGCSSLKTSINGDDDDNKGKRVGSVSNSSSSAVVIEDESEEELELEEEGNRTMKKRNNKIFGFSVTQDDNFPVTRQFFPMDQETDMTIAASSGGTLSSSSFPRAHWVGVKFCQSETLGNGKSVETSQPMKKSRRGPRSKSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNIEDYEEDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDKAAIKCNGKEAVTNFDPSIYDSELNSAEPASNAADHNLDLSLGNSSSKPINNTRAFGSHTTNATNHDQHLSSESNWQNGGNKPKLVNILPKPYINRPNNTEGYGRDFHGDSEALRMLSQTHLHSSSSNEMQRYAPFRDSQMFHSFAHTHPPNFHFPSSSYVNHVGSELSLSTRNEQEEWQSRPQYLTTAAAASSGFPPQIRPSSQAWLHKNGFHTLMRPS 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01426 511 PRINTS Ethylene responsive element binding protein signature 251 262 IPR001471 GO:0003700|GO:0006355
Car07g01426 511 PRINTS Ethylene responsive element binding protein signature 289 309 IPR001471 GO:0003700|GO:0006355
Car07g01426 511 SUPERFAMILY DNA-binding domain 157 215 IPR016177 GO:0003677
Car07g01426 511 CDD AP2 157 215 IPR001471 GO:0003700|GO:0006355
Car07g01426 511 ProSiteProfiles AP2/ERF domain profile. 250 307 IPR001471 GO:0003700|GO:0006355
Car07g01426 511 SMART rav1_2 158 220 IPR001471 GO:0003700|GO:0006355
Car07g01426 511 SMART rav1_2 250 313 IPR001471 GO:0003700|GO:0006355
Car07g01426 511 MobiDBLite consensus disorder prediction 134 159 - -
Car07g01426 511 MobiDBLite consensus disorder prediction 317 372 - -
Car07g01426 511 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 509 - -
Car07g01426 511 SUPERFAMILY DNA-binding domain 249 309 IPR016177 GO:0003677
Car07g01426 511 ProSiteProfiles AP2/ERF domain profile. 158 214 IPR001471 GO:0003700|GO:0006355
Car07g01426 511 PANTHER AP2 DOMAIN TRANSCRIPTION FACTOR 1 509 - -
Car07g01426 511 MobiDBLite consensus disorder prediction 1 19 - -
Car07g01426 511 Gene3D AP2/ERF domain 249 308 IPR036955 GO:0003700|GO:0006355
Car07g01426 511 Gene3D AP2/ERF domain 157 216 IPR036955 GO:0003700|GO:0006355
Car07g01426 511 CDD AP2 249 309 IPR001471 GO:0003700|GO:0006355
Car07g01426 511 Pfam AP2 domain 158 206 IPR001471 GO:0003700|GO:0006355
Car07g01426 511 Pfam AP2 domain 249 298 IPR001471 GO:0003700|GO:0006355
Car07g01426 511 MobiDBLite consensus disorder prediction 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01426 Car-Chr7 13499828 13503311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01426 1 338 AP2-EREBP Transcription Factor Family AT4G36920 69.209 3.03e-133 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Car07g01426 AP2 8.7e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01426 K09284 - gmx:100792442 719.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01426 07 13499828 13503311 Car07g01426 07 13499828 13503311 ECH
Car08g00479 08 4016090 4020110 Car07g01426 07 13499828 13503311 PCT