Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01415 ATGGCTCTCAGAGAACAACAACAACACTCTCCTTCCTTCCTCGATGCCCTTCTCTGTGAAGAACAAAACAACTTCGAAGACGATTTCGATGCAAACGTTACCGATTCCGAAACCAATACCAACGACCCATCTACTAAAAAGTTCCAATCTTTACCCTCGATTTTACTTGACAATGATCTTTTCTGGGAACACGATGAACTCGTTTCGTTAATCTCGAAAGAAAAAGAGACCCATTTGTTTTCTTCTCTTGATGATAATAATAATCTCATTGTTGTTGATGGATCTTTGGAAGATTCTCGTGTTGAAGCTGTGAACTGGGTTTCTAGAGTTTGTTCACACTATGGATTTTCTGCTTTGACCACTGTTCTTGCTGTGAACTACTTTGATAGATTCATCACTAGTTTGAAGTTTCAAAAGGATAAGCCATGGATGACACAGCTTACTGCTGTTGCTTGTTTGTCACTTGCTGCTAAAATGGAAGAGACCCACGTGCCACTTCTTTTAGACCTTCAAGTTGAGGATTCTAGATTTGTGTTTGAAGCTAAGACTATACAGAGAATGGAGCTTTTGGTTTTGTCAACTCTGAAGTGGAGGATGCATCCTGTGACACCGATTTCTTTCTTTGAACACATTGTTAGAAGGCTTGGTTTGAAGAGCCGTTTGCATTGGGAGTTTATGTGGCGTTGTGAGAGGGTTCTTCTTCATGTCATTGTGGATTCAAAGGCTATGATGAGTTATCTTCCTTCTACATTGGCTGCTGCTACAATGATCCATGTAATTAAAGAGATTGAACCATTTAATGCAACTGAGTACATTGATCAACTCATGGGTTTATTAAAGATTAGCGAGGAACAAGTGAACCAGTGCTACAAACTTATGCTGAAGCTGTTAGTTTGCCATGATGGTATTTACAGTCTTCATCAGAAACGCAAACACCTATCTGAACCAAGTAGCCCAGGTGGTGTCATGGATGCATCTTTCAGTTGTGATAGCTCAAATGATTCATGGACTGTGGCATCATCTTCGGTTTCTCCTTCGCTGCAGCCGGTGTTTAAGAGGAGCAGAGCTCAGGACCAGCAAATGCGATTGCCTTCTGTTAATCGTGTGTCTATTGATGTTCTTAATAGCCCTCGTTAA 1137 0.4081 MALREQQQHSPSFLDALLCEEQNNFEDDFDANVTDSETNTNDPSTKKFQSLPSILLDNDLFWEHDELVSLISKEKETHLFSSLDDNNNLIVVDGSLEDSRVEAVNWVSRVCSHYGFSALTTVLAVNYFDRFITSLKFQKDKPWMTQLTAVACLSLAAKMEETHVPLLLDLQVEDSRFVFEAKTIQRMELLVLSTLKWRMHPVTPISFFEHIVRRLGLKSRLHWEFMWRCERVLLHVIVDSKAMMSYLPSTLAAATMIHVIKEIEPFNATEYIDQLMGLLKISEEQVNQCYKLMLKLLVCHDGIYSLHQKRKHLSEPSSPGGVMDASFSCDSSNDSWTVASSSVSPSLQPVFKRSRAQDQQMRLPSVNRVSIDVLNSPR 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01415 378 Gene3D - 98 200 - -
Car07g01415 378 Pfam Cyclin, N-terminal domain 97 199 IPR006671 -
Car07g01415 378 Gene3D - 201 291 - -
Car07g01415 378 PANTHER CYCLINS 5 361 IPR039361 -
Car07g01415 378 SMART Cyclin_C_2 202 331 IPR004367 -
Car07g01415 378 SMART cyclin_7 105 193 IPR013763 -
Car07g01415 378 Pfam Cyclin, C-terminal domain 202 302 IPR004367 -
Car07g01415 378 SUPERFAMILY Cyclin-like 61 200 IPR036915 -
Car07g01415 378 SUPERFAMILY Cyclin-like 203 312 IPR036915 -
Car07g01415 378 PANTHER CYCLIN-D3-2 5 361 - -
Car07g01415 378 CDD CYCLIN 99 192 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01415 Car-Chr7 13323964 13326128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01415 1 368 Core Cell Cycle Gene Families AT5G67260 50.923 2.96e-112 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01415 K14505 - gmx:100785030 572.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02763 05 72724747 72726832 Car07g01415 07 13323964 13326128 ECH
Car07g01415 07 13323964 13326128 Car07g01415 07 13323964 13326128 ECH