Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01411 ATGGAAGCAGTTTCATATTCGATCCCCTCTACCAAATTCCAATCACTTCAACATATCCACACCAAAACCACTATAATCCAATCCTCCAACCTCACTTTTCGCCTTCGCTCATCCCCGATTTCAATCAAACCTTTTTACTCTTCCAAATTTCTCATTCTCCATCACCATAAGCTTCGTTGCGCCGCCGaatccacaactaaccaccatcaccacaatcacaatcacaatcacaaccacaaccacaaccacaacgatcatcacaaccataaccataatcatgaccatgaccatcaccaccatcatcaccatcaTTCACACGGCATCGATTATGCTAATCTGACTGGACCTCAAAAAGCGATAATCAGTTTCGCCAAAGCCACCAAATGGATGGACCTAGCAAATATCTTGAGAGAGCATTTGCATCTATGTTGCTTCTCCGCCGCATTATTTGTAGCCGCAGCTATTTGCCCTCATACTTTGCCAAAATCACTCATCAAACCCTTTCAAAACTCTCTCATTCTCGTCGCTTTTCCTTTGGTTGGGGTTTCTGCATCACTTGATGCTCTAATTGAAATTAGTAGTGGAAAAGTGAACATCCATGTGCTAATGGCAATGGCAGCTTTTGCATCAATTTTTATGGGAAACTCTTTGGAAGGAGGGTTGCTTCTTGCAATGTTTAATCTTGCACATATAGCTGAAGATTATTTCACGGGACGTTCAATGGTTGATGTTAAAGAGTTGAAGGAGAACTATCCAGATTTTGCACTTGTTTTGGATACAAAAGATGATAAACTTCCTAATACGTTTGACTTGGCTTACAAAAGGGTTCCTGTGCATGATATAACTGTAGGATCGTATGTCCTTGTTGGTGCTGGAGAGTCTGTGCCTGTAGATTGTGAAGTTTTCCAAGGCGGTGCCACCATTACTATTGAGCACTTGACAGGGGAAGTCAAACCTCTGGAGGCCAAAGTTGGAGATAGAGTTCCTGGCGGTGCAAGGAACTTAGATGGGAGAATAATTGTGAAGGTAACAAAGTCATGGAAGGAATCAACTCTCAACAGAATTGTGCAGTTGACTGAAGAAGCTCAGTTGAATAAACCTAAACTTCAAAGGTGGCTGGATGAATTTGGTGAACGTTACAGCCAAGTTGTTGTGGTGTTATCAATTGCTATTGCTGTTGTTGGACCACTTGTATTTAAGTGGCCATTCATTAGCACGCCAGCTTGCAGGGGTTCTATTTACAGAGCTTTAGGGCTCATGGTTGCAGCATCACCATGTGCCTTGGCTGTGGCTCCATTGGCATATGCCACAGCAATCAGTTCCTGTGCAAAAAAGGGCATATTACTCAAAGGTGGACATGTTCTTGATGCACTAGCTTCATGCCATACCATTGCATTTGATAAAACAGGGACATTGACTACTGGTGGACTTGTATTCAAGGCAATTGAGCCCATTTATGGTCATCACTTTAGAAACAAGGAATCTAACATTTCTTCCTGTTGCATTCCTACCTGTGAAAAAGAAGCTCTTGCTGTTGCTGCAGCTATGGAAAAGGGCACTACCCACCCCATTGGAAGGGCTGTGGTTGACCATAGTGAAGGGAAAGACCTCCCTTCAGTTTCTGTTGAAAATTTTGAATACTTTCCTGGTAGAGGCCTTACTGCCACTGTTAACAGCATTGAGTCAGGAAGTGGAGGTGCTAAACTATTGAAAGCATCACTTGGGTCTATAGATTTCATCACTTCATTTTGTCAATCTGAAGATGAATTAAAAAAGATCAAGGAAGCTATTAATGCATCTTCTTATGGCAGCGAATTTGTTCATGCAGCCCTTTCAATTAATAAAAAGGTAACATTGATTCACCTGGAGGATAATCCTCGTCCAGGGGTTTCTGATGTTATTCAAGAATTGCAGGATGAAGCAAAGTTTCGTGTGATGATGTTAACTGGTGATCATGAATATAGTGCAAGGAGAGTTGCAAAAGCTGTGGGTATCAATGAGTTTCATTGCAACCTGAAGCCTGAAGATAAGCTGAGTCATGTAAAGGATACCTCGAGAGATATGGGGGGAGGCTTAATTATGGTTGGTGAAGGTATTAATGATGCCCCAGCTCTTGCTGCTGCAACTGTTGGGATTGTGCTTGCTCATCGTGCTAGTGCAACTGCTATAGCTGTTGCAGATGTGCTGTTGCTTCGAGAAAATATCACTGCAGTGCCATTTTGTATTGCCAAATCTCGCCAGACAACTTCACTGATTAAGCAAAATGTGGCTCTAGCATTGTTCTGCATTGTCATGGCTTCCCTTCCGTCAGTTTTAGGATTTCTGCCATTGTGGTTAACGGTTCTCTTGCATGAAGGTGGAACCCTACTTGTTTGTCTCAATTCCGTACGTGCTTTACATGAACCATCCTGGTCCTGGAAGCATGATATATTACAGTTGATTGGTGAGGTTAAATCTACACTCCCCTCTCTTAGGACAAATATCACCAGCTCAAGCAGCGTTACAACCGCAAATTTATGA 2520 0.4036 MEAVSYSIPSTKFQSLQHIHTKTTIIQSSNLTFRLRSSPISIKPFYSSKFLILHHHKLRCAAESTTNHHHHNHNHNHNHNHNHNDHHNHNHNHDHDHHHHHHHHSHGIDYANLTGPQKAIISFAKATKWMDLANILREHLHLCCFSAALFVAAAICPHTLPKSLIKPFQNSLILVAFPLVGVSASLDALIEISSGKVNIHVLMAMAAFASIFMGNSLEGGLLLAMFNLAHIAEDYFTGRSMVDVKELKENYPDFALVLDTKDDKLPNTFDLAYKRVPVHDITVGSYVLVGAGESVPVDCEVFQGGATITIEHLTGEVKPLEAKVGDRVPGGARNLDGRIIVKVTKSWKESTLNRIVQLTEEAQLNKPKLQRWLDEFGERYSQVVVVLSIAIAVVGPLVFKWPFISTPACRGSIYRALGLMVAASPCALAVAPLAYATAISSCAKKGILLKGGHVLDALASCHTIAFDKTGTLTTGGLVFKAIEPIYGHHFRNKESNISSCCIPTCEKEALAVAAAMEKGTTHPIGRAVVDHSEGKDLPSVSVENFEYFPGRGLTATVNSIESGSGGAKLLKASLGSIDFITSFCQSEDELKKIKEAINASSYGSEFVHAALSINKKVTLIHLEDNPRPGVSDVIQELQDEAKFRVMMLTGDHEYSARRVAKAVGINEFHCNLKPEDKLSHVKDTSRDMGGGLIMVGEGINDAPALAAATVGIVLAHRASATAIAVADVLLLRENITAVPFCIAKSRQTTSLIKQNVALALFCIVMASLPSVLGFLPLWLTVLLHEGGTLLVCLNSVRALHEPSWSWKHDILQLIGEVKSTLPSLRTNITSSSSVTTANL 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01411 839 SFLD p-type atpase 447 748 IPR044492 -
Car07g01411 839 Gene3D - 458 746 IPR023214 -
Car07g01411 839 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 199 797 IPR027256 GO:0006812|GO:0016021|GO:0019829
Car07g01411 839 Gene3D - 239 363 - -
Car07g01411 839 Pfam haloacid dehalogenase-like hydrolase 463 708 - -
Car07g01411 839 SUPERFAMILY Calcium ATPase, transmembrane domain M 201 779 IPR023298 -
Car07g01411 839 Pfam E1-E2 ATPase 273 445 - -
Car07g01411 839 SUPERFAMILY HAD-like 463 795 IPR036412 -
Car07g01411 839 MobiDBLite consensus disorder prediction 65 109 - -
Car07g01411 839 PRINTS P-type cation-transporting ATPase superfamily signature 109 123 - -
Car07g01411 839 PRINTS P-type cation-transporting ATPase superfamily signature 618 629 - -
Car07g01411 839 PRINTS P-type cation-transporting ATPase superfamily signature 641 651 - -
Car07g01411 839 PRINTS P-type cation-transporting ATPase superfamily signature 695 714 - -
Car07g01411 839 PRINTS P-type cation-transporting ATPase superfamily signature 719 731 - -
Car07g01411 839 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 273 487 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Car07g01411 839 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 593 775 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Car07g01411 839 SFLD C1.7: P-type atpase like 447 748 - -
Car07g01411 839 CDD P-type_ATPase_HM 141 797 - -
Car07g01411 839 ProSitePatterns E1-E2 ATPases phosphorylation site. 467 473 IPR018303 -
Car07g01411 839 Gene3D - 476 626 IPR023299 GO:0000166
Car07g01411 839 MobiDBLite consensus disorder prediction 70 106 - -
Car07g01411 839 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 87 830 - -
Car07g01411 839 SUPERFAMILY Calcium ATPase, transduction domain A 273 358 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01411 Car-Chr7 13256405 13266590 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01411 116 823 Primary Pumps ATPases AT4G37270 76.130 0.0 1088
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01411 K01534 - gmx:100776309 1351.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01411 07 13256405 13266590 Car07g01411 07 13256405 13266590 ECH