Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01406 ATGCCTTGTTTGACTTGGAAGCAAAGGCTTGAGATTTGTATTGGTGCTGCTAGAGGTCTTCATTACCTTCACAAAGGAGCAACCGGAGGAATCATTCACCGCGATGTGAAATCCACAAACATACTGCTTGATGAGAATCATGTAGCTAAAGTTGCGGATTTTGGTCTTTCGAGAACCGGTCCTCTCGATCAGCATTCTTATGTCAGCACAGGTGTTAAAGGAACTTTTGGGTATCTTGATCCTGAGTACTTTAGATCACAACAACTGACAGAAAAATTTGATGTCTATTCATTTGGGGTGGTTCTACTTGAAGTGTTGTGTTCAAGACCAGCGATTGAACCGTCGCTTCCGAGGGAACAGGTGAACTTGGCTCAATGGGGATTGTTTTGCAAAGATAAAGGAATGCTAGAAGACATCATTGATAATTCCATTAAGGGACAAATTGATCCAAACTCACTTAAAAAGTTTAGTGAGACAGTGGAAAAATGCTTACAAGATGATGGTTGTGATAGGCCTACAATGGGTGATGTTTTGTGGGACTTGGAATATGCTTTGCAGCTTCAGAAAGGTGCAATACACAGAGAACCACATGAGGATAGTTCTATCAGTCCTTCTGTTTCAATTCAGTTGTCGAACATTCGGCATTTGCCTTCTCTGTCTACACTGAGAGAAGTGGATGACATGTCTACTGGGAGGGTTGATGAATCTAATTGTGCAGCAGATTCTGTTTTCTCACAGTTGAAGATTGAGGAAGCCAGATAG 762 0.4173 MPCLTWKQRLEICIGAARGLHYLHKGATGGIIHRDVKSTNILLDENHVAKVADFGLSRTGPLDQHSYVSTGVKGTFGYLDPEYFRSQQLTEKFDVYSFGVVLLEVLCSRPAIEPSLPREQVNLAQWGLFCKDKGMLEDIIDNSIKGQIDPNSLKKFSETVEKCLQDDGCDRPTMGDVLWDLEYALQLQKGAIHREPHEDSSISPSVSIQLSNIRHLPSLSTLREVDDMSTGRVDESNCAADSVFSQLKIEEAR 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01406 253 SMART serkin_6 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01406 253 PANTHER BNAC03G27170D PROTEIN 4 211 - -
Car07g01406 253 ProSiteProfiles Protein kinase domain profile. 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01406 253 PANTHER OS07G0166700 PROTEIN 4 211 IPR045272 GO:0004714|GO:0006468
Car07g01406 253 Gene3D Transferase(Phosphotransferase) domain 1 1 205 - -
Car07g01406 253 Pfam Protein tyrosine and serine/threonine kinase 3 178 IPR001245 GO:0004672|GO:0006468
Car07g01406 253 SUPERFAMILY Protein kinase-like (PK-like) 3 214 IPR011009 -
Car07g01406 253 ProSitePatterns Serine/Threonine protein kinases active-site signature. 31 43 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01406 Car-Chr7 13170070 13170831 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01406 1 253 Receptor kinase-like Gene Family AT3G46290 58.113 8.70e-99 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Car07g01406 PK_Tyr_Ser-Thr 2.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01406 - - cam:101496146 513.072