Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01400 ATGACTTTCCTTAAGGAGAGCAAACACAATGATAAATCCTCAATCAATAAACAAGAACTTGATGATCGATCACAAAACACTAACAGCTATGAAACTATAATCCCTGAAGAGGATGATGACAACATAGGAGAATGGTTGAGTTTAGGAATCAAAGGAGACATGTCTCTTGAAGTAGCTAATCAAAACCCAGATTTTCAATCTCAATCATCAAAACCTGTTCAAAACAACAAGGTTTTTTCATGCAACTTCTGCATGAGAAAGTTTTACAGTTCACAGGCTTTAGGTGGTCACCAGAATGCACACAAAAGAGAAAGAGAAGCTGCTAGAAGTTACCACCAATCTCATAGGATGATCACATCATCAATGGCACTTGGAATTGTCCAACCTCACTCTCTTGTGCACAAACAAAACAGAGAAAGCTCTGCTATGGTAGCTCGATTCGACGATGCGAGTTCTGGAATTGGAATGACATGGACACCCTTTGTTCTTGAAGAACAAGCTTTGAATTTTGTATGGCCCGGAAGCTTTCGGATGGATAAGCCAAAGCAAGAATCAGATATGCCTAAGCTTGATTTAGATCTTCGGCTTTGA 591 0.3942 MTFLKESKHNDKSSINKQELDDRSQNTNSYETIIPEEDDDNIGEWLSLGIKGDMSLEVANQNPDFQSQSSKPVQNNKVFSCNFCMRKFYSSQALGGHQNAHKREREAARSYHQSHRMITSSMALGIVQPHSLVHKQNRESSAMVARFDDASSGIGMTWTPFVLEEQALNFVWPGSFRMDKPKQESDMPKLDLDLRL 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01400 196 MobiDBLite consensus disorder prediction 1 19 - -
Car07g01400 196 MobiDBLite consensus disorder prediction 1 30 - -
Car07g01400 196 PANTHER ZINC FINGER PROTEIN 4-LIKE 1 196 - -
Car07g01400 196 SUPERFAMILY beta-beta-alpha zinc fingers 75 106 IPR036236 -
Car07g01400 196 Gene3D Classic Zinc Finger 57 133 - -
Car07g01400 196 ProSitePatterns Zinc finger C2H2 type domain signature. 81 101 IPR013087 -
Car07g01400 196 ProSiteProfiles Zinc finger C2H2 type domain profile. 79 106 IPR013087 -
Car07g01400 196 PANTHER ZINC FINGER PROTEIN 4-LIKE 1 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01400 Car-Chr7 13131250 13132358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01400 67 177 C2H2 Transcription Factor Family AT1G24625 42.017 2.45e-22 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01400 - - ccaj:109809498 224.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01400 07 13131250 13132358 Car07g01400 07 13131250 13132358 ECH