Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01399 ATGTCTCCAAACCGGCGAGAACATGAACAACCACTGTTATTACAACAAGAAAAGTCACAAGAAACAGCATACGATTCCTCAGAAAAAATAGTAGTGGTCGGAATCGACGAATCAACGAACTGGGACACTGAAGTTCCACCATTTTCATGGAAGAAGCTATGGCTATTCACAGGTCCAGGTTTTCTAATGAGCATAGCTTTTTTGGATCCAGGGAACTTAGAAGGGGACCTACAAGCTGGTGCATTTGCTGGGTATTCATTGCTATGGCTTCTTATGTGGGCCACAGCAATGGGGCTTTTGATTCAGCTTTTGTCAGCTAGGCTTGGTGTTGCTACTGGGAAGCATTTGGCTGAGCTTTGTAGGGAGGAGTACCCTAAGTGGGCTAGGATGGTGCTTTGGGTTATGGCTGAATTAGCTCTTATTGGTTCTGATATACAAGAGGTTATTGGTAGTGCTATTGCTATTAGGATTCTTAGTAATGGCATTCTTCCCATTTGGAGTGGTGTTATCATTACTGCTCTTGATTGTTTTATTTTTCTCTTTCTTGAGAACTATGGTGTGAGGTCATTGGAAGCTTTTTTTGCTGTTCTCATTGGTGTAATGGCGCTAGCTTTTGCATGGATGTTTGGTGAGGCAAAGCCAAGTGGCAAGGAACTTCTAGTTGGCATTTTGGTTCCAAAACTCAGCTCCAGAACTATACAGCAAGCTGTTGGAGTTGTGGGCTGTCTTATAATGCCTCACAATGTATTCTTGCATTCTGCTCTTGTTCAGTCAAGACAGGTTGATCACAGCAACAAAGGCCGAGTTCAAGAAGCGATTAACTATTACTCAATAGAGTCTACCCTTGCCCTGATAGTCTCCTTTGGTATTAACATACTTGTCACAGCCGTGTTCGCCAAGGGGTTTTATGGTTCCGAAATAGCAGATAGTATTGGACTTGTAAATGCAGGACAGTATCTTCAGGAAACTTATGGAGGGGGACTATTACCGATATTGTATATATGGGGTATTGGTTTGTTAGCAGCTGGCCAAAGTAGCACTATAACTGGTACTTACGCCGGACAATTTATCATGGAAGGTTTTCTAAATTTAAGGTTGAAGAAATGGCTGAGGGCATTGATTACTCGAAGTTTTGCGATAATCCCAACCATGATAGTTGCCCTTATGTTTGATGCCACAGAGGGTTCACTGGATGTTCTGAATGAGTGGCTTAATGTTCTTCAGTCAGTCCAAATCCCCTTTGCACTTATTCCTTTGCTCTGTCTGGTATCCCAAGAACGGATAATGGGCACTTTCAAAATCGGCACTGTCCTCAAGACTATTTCTTGGTTTGTGACTGCTCTTGTGACAGTGATTAATGGCTATCTGTTGTTGGAATTCTTCACATCTGAAGTGAATGGAGTAGTAGTTGGTGCTGTAGTGTGTGCACTAACTGCTGCATATGTTGCATTCATAATATATCTTATTTGGGGGGCCACGTCCTTTTTGCCTAGACAAAGCGGACCAAAGGCGATACTTCACTCAGACAGTTGA 1533 0.4266 MSPNRREHEQPLLLQQEKSQETAYDSSEKIVVVGIDESTNWDTEVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAFAGYSLLWLLMWATAMGLLIQLLSARLGVATGKHLAELCREEYPKWARMVLWVMAELALIGSDIQEVIGSAIAIRILSNGILPIWSGVIITALDCFIFLFLENYGVRSLEAFFAVLIGVMALAFAWMFGEAKPSGKELLVGILVPKLSSRTIQQAVGVVGCLIMPHNVFLHSALVQSRQVDHSNKGRVQEAINYYSIESTLALIVSFGINILVTAVFAKGFYGSEIADSIGLVNAGQYLQETYGGGLLPILYIWGIGLLAAGQSSTITGTYAGQFIMEGFLNLRLKKWLRALITRSFAIIPTMIVALMFDATEGSLDVLNEWLNVLQSVQIPFALIPLLCLVSQERIMGTFKIGTVLKTISWFVTALVTVINGYLLLEFFTSEVNGVVVGAVVCALTAAYVAFIIYLIWGATSFLPRQSGPKAILHSDS 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01399 510 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 11 500 - -
Car07g01399 510 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 51 429 IPR001046 GO:0016020|GO:0030001|GO:0046873
Car07g01399 510 PRINTS Natural resistance-associated macrophage protein signature 132 158 IPR001046 GO:0016020|GO:0030001|GO:0046873
Car07g01399 510 PRINTS Natural resistance-associated macrophage protein signature 162 181 IPR001046 GO:0016020|GO:0030001|GO:0046873
Car07g01399 510 PRINTS Natural resistance-associated macrophage protein signature 187 208 IPR001046 GO:0016020|GO:0030001|GO:0046873
Car07g01399 510 PRINTS Natural resistance-associated macrophage protein signature 236 259 IPR001046 GO:0016020|GO:0030001|GO:0046873
Car07g01399 510 PRINTS Natural resistance-associated macrophage protein signature 343 362 IPR001046 GO:0016020|GO:0030001|GO:0046873
Car07g01399 510 PRINTS Natural resistance-associated macrophage protein signature 371 388 IPR001046 GO:0016020|GO:0030001|GO:0046873
Car07g01399 510 PRINTS Natural resistance-associated macrophage protein signature 405 424 IPR001046 GO:0016020|GO:0030001|GO:0046873
Car07g01399 510 Hamap Divalent metal cation transporter MntH [mntH]. 42 461 IPR001046 GO:0016020|GO:0030001|GO:0046873
Car07g01399 510 Pfam Natural resistance-associated macrophage protein 74 435 IPR001046 GO:0016020|GO:0030001|GO:0046873
Car07g01399 510 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 11 500 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01399 Car-Chr7 13118108 13121963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01399 7 497 Inorganic Solute Cotransporters AT2G23150 76.210 0.0 755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01399 K21398 - gmx:100812381 839.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01399 07 13118108 13121963 Car07g01399 07 13118108 13121963 ECH
Car08g00456 08 3825718 3829814 Car07g01399 07 13118108 13121963 PCT